Riemerella anatipestifer RA-GD: RIA_0006
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Entry
RIA_0006 CDS
T02007
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar03030
DNA replication
rar03430
Mismatch repair
rar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RIA_0006
03430 Mismatch repair
RIA_0006
03440 Homologous recombination
RIA_0006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rar03032
]
RIA_0006
03400 DNA repair and recombination proteins [BR:
rar03400
]
RIA_0006
Enzymes [BR:
rar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RIA_0006
DNA replication proteins [BR:
rar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RIA_0006
DNA repair and recombination proteins [BR:
rar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RIA_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ADZ11209
LinkDB
All DBs
Position
complement(4000..5037)
Genome browser
AA seq
345 aa
AA seq
DB search
MKELEIILKNIKNKELLPIYFFHGEEPYYIDVAIKHFENEVLTEDEKAFNQTVVYGKDTT
YSEVLALARQFPMMGDRQLIVLKEAQDIRLTEKETEALEAYVNNPVPSTILVIAHKHKKV
DSRKKFAKTLAKNKMLFLSEPVKDWNLPQFIQDEISRAGLKAEPNIPTILAEYLGNDLSR
IANEINKLKLILKEGEVLNSLLVEKHIGISKDYNVFELQKALGTKNEEQAMKIAYYIGKN
PKSNPFVMMLGSLYNYFSNLIVFHSLKGMSPQSIAAEMGVNPYFIKDYETSARLYPLKHA
TRIISILREFDMKSKGLGAVNMTDAELLKEMVYKILNVDKTKVKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagttagaaataatcctcaaaaatattaaaaataaagaacttctccctatttat
ttttttcatggggaagagccttattatatagatgtagcgataaaacatttcgaaaatgaa
gtcctcacagaagatgaaaaagcatttaaccagaccgtagtttatggtaaggatactact
tattcagaagtattggcactggcaaggcagttcccaatgatgggcgacagacagcttatt
gtactcaaagaggctcaagatattagacttacggaaaaagaaacagaagccctagaagcc
tatgttaataatcctgtgccgtctaccattttggtaattgctcataagcataaaaaagta
gattctagaaaaaagtttgctaaaactttggctaagaataaaatgcttttccttagtgaa
cctgtcaaagattggaatttacctcaatttatacaagatgaaatttctagagcagggctg
aaagcagaacctaatattcccacaattttagccgaatatctaggaaacgacctttctaga
atagctaatgaaatcaataaacttaaactgattttaaaggaaggcgaggtacttaatagc
cttcttgtagagaaacatattgggattagtaaagattataatgtatttgaattacaaaag
gcattaggaacgaagaatgaagaacaagcgatgaaaatagcttattacatcggtaaaaat
ccaaaatctaatccgtttgtgatgatgttgggtagtttgtacaattatttttctaacctc
attgtttttcatagtcttaaaggtatgtcgccacagagtattgcggcagagatgggcgtt
aatccttattttattaaagattatgaaacttcggcgagactttatccgctaaaacacgct
actagaattatatccattcttagagaatttgatatgaaaagtaaaggtctaggagcggta
aatatgacggacgctgagcttcttaaagaaatggtttataaaattttgaatgtagataaa
acaaaagttaaagtataa
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