Riemerella anatipestifer RA-GD: RIA_0011
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Entry
RIA_0011 CDS
T02007
Name
(GenBank) permease YjgP/YjgQ family protein
KO
K07091
lipopolysaccharide export system permease protein
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIA_0011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rar02000
]
RIA_0011
Transporters [BR:
rar02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
RIA_0011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
ADZ11214
LinkDB
All DBs
Position
9555..11009
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AA seq
484 aa
AA seq
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MLKKLDRYIIKTFFGPFLFIFSVLFFIFLVNIIWIKLYQFTGKGLSPFEIGKLLFYMGVS
VVNMVLPLTVLLSSIMTFGAFGERYELAAMKAAGISLFRIMRPLIFVVTLLSIILFIFSN
NVIPDFNRKAKNMLYNIAVTKPALNFTAGQFIGAIPGASVKFDKISGENGENLEGIIIHK
EVNGNNPQQTIIAPKGKFVPAQNRNYLKLILYKGYVYEDENTSYNYNERTKQPNKSIKFD
SLVAHFDVSELVNKAIEEEKITENYQFQTYLDINGSIAQLEKEQKTRFDNISNELVAQNN
FYVNYLDKSKNKKATQPFKIDTLKKEKKIEILYNAYQKINTLKEDKKSNKDPELYEMLKQ
RSKMIMYQQRILSFSITCIIFFLIGSSLGSIIRKGGIGFPVVIAIVIFIIFYVLNLTVEN
LSWKGKLNPYLAAWLPNLILAPLGIWFTVKALTDSQILDAEKYKAFFKPIIQKFSKNQEH
KRYQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaactagatcgctatatcattaaaactttttttggaccgtttttgttcata
ttcagcgtattgttttttattttcttggttaatatcatttggattaaactctatcagttt
acaggaaaagggctttctccctttgaaataggcaaacttttgttctatatgggcgttagc
gtagttaatatggtactccctcttacggtactcctttcttccataatgaccttcggagca
tttggtgaacgctatgaactcgcagcaatgaaagcggcaggtatctcgttatttagaatt
atgcgtccgctcatattcgttgtaacgctactctccatcattttatttatcttttctaat
aatgtaattccagatttcaacagaaaagccaaaaatatgctctacaatattgcggttacc
aaacctgcactcaactttactgcaggtcaatttatcggagcaatacctggagcatctgta
aaatttgataaaatttctggagaaaatggcgagaatttagaaggcatcatcatccataaa
gaagtaaatggaaacaatccacaacaaactattattgctcctaaagggaagtttgtacct
gcacaaaacagaaactatctaaaactcatcttatataaaggttatgtttatgaagatgaa
aatactagctacaattataatgaaaggactaaacaacctaacaaaagtataaaattcgat
agtttagtagcccattttgacgtaagtgaacttgtaaacaaagccatagaagaagaaaaa
attaccgaaaattatcaattccaaacctatctagacatcaatggttctatcgctcagcta
gaaaaagagcaaaagactaggtttgataatattagtaacgagctagtggctcagaataat
ttttatgtcaattatttagataaatcaaaaaataaaaaagctacacaaccttttaaaatt
gatacgctaaaaaaagagaagaaaatagagattctttataatgcatatcaaaaaataaac
actcttaaagaggacaaaaaaagcaataaagaccctgagttatacgagatgcttaaacaa
cgtagcaagatgattatgtatcagcagaggatactttcattctccattacttgcatcata
tttttccttattggttctagcttgggctccatcattaggaaaggaggcattggctttcct
gtggttattgcgattgtcatattcattattttttatgttcttaacttaaccgttgaaaat
ctatcttggaaagggaaactcaacccttatttagcagcatggctcccaaacttaatacta
gctcctctaggtatatggtttactgtaaaagcacttacagattcgcaaattttagatgct
gaaaagtataaagctttctttaaacctataatacagaaattctcaaagaatcaagagcat
aagaggtatcaatag
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