Riemerella anatipestifer RA-GD: RIA_0152
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Entry
RIA_0152 CDS
T02007
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rar
Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rar03016
]
RIA_0152
Enzymes [BR:
rar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RIA_0152
Transfer RNA biogenesis [BR:
rar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RIA_0152
Prokaryotic type
RIA_0152
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF276
Motif
Other DBs
NCBI-ProteinID:
ADZ11339
LinkDB
All DBs
Position
complement(150318..151016)
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AA seq
232 aa
AA seq
DB search
MTLEEIQAGQVFLVDKPLDWTSFQAVNKMKFKLKREFKLKKIKIGHAGTLDPRATGLLVV
CTGKATKTIPEIQNAPKEYHAEIKIGVQTASYDTEEPEILPQDISTITKEQILETLDSFV
GEIDQTPPIFSAIKVDGERAYNLARAGEEVELKKRKTTIYFIDNIEVDLPFVRFSVGCSK
GTYIRSLAHDIGQALGVGAYLTQLRRTKIGDFSVEQASEQFLTNEFSFTNNI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacattagaagaaatacaagctggacaggtatttttggtagataagcctttggattgg
acttcctttcaggcggttaacaaaatgaaattcaaactgaaaagagagtttaagctaaag
aagattaaaattggtcatgcaggaacattagaccctagagccacagggcttttggtggtc
tgcacaggcaaagctaccaagactatcccagaaatacaaaatgctccaaaagagtaccac
gccgaaataaaaattggagtccagacggcttcttatgacaccgaagaaccagaaatatta
ccccaagatattagtaccatcactaaagagcaaattttagaaactttggatagctttgtg
ggagagatagaccaaacgccacctatattttctgcgattaaagtagatggcgaaagagca
tacaatcttgccagagcaggtgaagaggtggaactaaagaaacggaaaaccaccatttac
tttatagacaatatagaggttgatttgccttttgtgaggtttagtgtagggtgttccaaa
gggacttatatccgaagtttagcacacgatataggtcaggctttaggtgtaggagcttat
cttacacagctgagaaggactaagattggtgatttttctgtagaacaggcttcggaacaa
tttttaacaaatgagtttagttttaccaataatatttaa
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