Riemerella anatipestifer RA-GD: RIA_0266
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Entry
RIA_0266 CDS
T02007
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00541
Biosynthesis of various nucleotide sugars
rar01100
Metabolic pathways
rar01250
Biosynthesis of nucleotide sugars
Module
rar_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RIA_0266
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rar01005
]
RIA_0266
Enzymes [BR:
rar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RIA_0266
Lipopolysaccharide biosynthesis proteins [BR:
rar01005
]
Lipid A
RIA_0266
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
ADZ11447
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All DBs
Position
228759..229568
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AA seq
269 aa
AA seq
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MIQHLDNISHKNSSNFFLVAGPCAIENGDMAMKIAEHIVKLSDKYKIPYIFKGSFKKANR
SRIDSFTGIGDEKALKILKKVGDTFGIPTTTDIHENEHATLAAQYVDVLQIPAFLVRQTD
LLVSAAKTGKCITLKKGQFLSPEAMKFAVQKIKDCDNDKVAIIERGNSFGYTDLVVDFRG
IPTMQNYAPVILDVTHSLQQPNQESGVTGGKPQLIETIAKAGIAVGADGLFIETHPDPKN
AKSDGANMLPLEQLDSLLAKLTKIREAII
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgatacaacatttagataatatcagtcataaaaattcttctaatttcttcctagtagca
ggaccttgtgccatagaaaacggagatatggcaatgaaaatagcagagcatattgtaaaa
ctttcggacaaatataaaatcccttacatctttaaaggaagttttaaaaaagccaatagg
tctaggatagattcctttacaggaataggagacgagaaagctcttaaaatacttaaaaaa
gtaggcgatacgttcggaatccccacgacaacagatattcacgaaaacgaacacgctact
cttgccgcacaatatgtagatgtattacaaatacctgctttcctagtaagacaaacagat
ttactcgtgtctgctgccaaaacaggaaagtgtattactctaaaaaaaggacagttcctc
tctcccgaggcaatgaaatttgcagtgcaaaaaataaaagactgcgacaatgataaagtt
gccattatagagcgaggtaattcttttggctataccgatttggtagtggactttagaggt
atccctacaatgcaaaattacgctcctgtaatattagatgtaacccactctttacaacag
cctaaccaagagtctggtgtaactggtggaaaacctcaactcatagaaaccattgctaaa
gcagggattgccgtaggtgcagacggactatttatagaaactcacccagaccctaaaaac
gcaaaatctgatggtgctaatatgctccctctagagcaactagactcacttttagctaaa
cttaccaaaataagagaggctattatttag
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