Riemerella anatipestifer RA-GD: RIA_0366
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Entry
RIA_0366 CDS
T02007
Name
(GenBank) Beta-lactamase class D
KO
K22351
beta-lactamase class D OXA-209 [EC:
3.5.2.6
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RIA_0366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rar01504
]
RIA_0366
Enzymes [BR:
rar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.6 beta-lactamase
RIA_0366
Antimicrobial resistance genes [BR:
rar01504
]
Gene variants
beta-Lactamase genes
Class D [MT]
RIA_0366
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
DUF6904
ZoocinA_TRD
Motif
Other DBs
NCBI-ProteinID:
ADZ11543
LinkDB
All DBs
Position
complement(315918..316775)
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AA seq
285 aa
AA seq
DB search
MCDRGNRKKHTKMKKTFILLNLILLVNLNGYCQTKSLKSNEIVKPEFRNILDSLKVKGAI
LIYDVKNKTYYSNDFSWTKTGIIPASTFKIPNSNRALETGIIKNDSTIFKWNGEKRKFKN
WEEDLTFKKAFQVSCVPCYQEIARKIGVKRMKRYLKKLNYRGMVFDTLTIDQFWLEGESK
ITQMQQIDFLERLYFSKLPISKRTERIMKDIMEIEKTESYTLNGKSGWGMRNKGNNGWLV
GYLETNKSVYFFATNIEKPETNIDEFPIIRLNSTKEAFRKLKLIK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgtgcgacagaggaaatagaaaaaaacatactaaaatgaaaaaaacatttatacttctg
aatctaattttattagtaaatcttaatggatattgtcaaactaaaagtttaaaatcaaat
gaaattgtaaaacctgaatttagaaatatattagatagtttaaaggtaaaaggagcaatt
ttaatttatgatgtaaaaaacaaaacttattattcaaatgatttttcttggacaaaaact
ggaataattcctgcatcgactttcaaaataccaaattcaaatagggcgttagaaacagga
ataatcaaaaatgactctacaatttttaaatggaatggtgaaaaacgcaaatttaaaaat
tgggaagaagatttgacttttaaaaaagcatttcaagtttcttgtgttccttgttatcaa
gaaattgccagaaaaattggtgtgaaaaggatgaaaagatatttgaaaaaattaaattac
agaggaatggttttcgatactttgacgattgatcaattttggttagaaggagaatctaaa
attactcaaatgcaacaaatagattttttagaacgattatacttttcaaaattaccgatt
tctaaaagaaccgaacgtataatgaaagacataatggagattgagaaaaccgaaagttat
actttgaacgggaaatcaggctggggaatgaggaataagggaaacaatggttggttagtt
ggatatttagaaacgaataaatctgtttattttttcgcaacaaatatagaaaaaccagaa
acgaatatagacgaatttccaattattcgattgaattcaacgaaagaagcatttagaaaa
ctgaaattaataaaataa
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