Riemerella anatipestifer RA-GD: RIA_0439
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Entry
RIA_0439 CDS
T02007
Name
(GenBank) TonB-dependent receptor, plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
rar
Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rar02000
]
RIA_0439
Transporters [BR:
rar02000
]
Other transporters
Pores ion channels [TC:
1
]
RIA_0439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
Motif
Other DBs
NCBI-ProteinID:
ADZ11608
LinkDB
All DBs
Position
393440..396310
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AA seq
956 aa
AA seq
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MFRKKTTAICYLLGLATFPSLALAQSHQDSVKTKVIEEVTLVNIGYGRKEFKKTSGSVAK
TNLDNIADRSVASVADVLQGKTAGVMVTGEGGDPTSIPKVTIRGLGGVNGEEPLYVIDGV
LFEKAPFINPNDIESMNVVKDATAAVYGARASGGVIFITTKKGKKGQLNINFDVKQGFQQ
AWRKKKALNAAEFQDIMTKAYQNAGLAVPRAFDPTTNPDGRITRTDWIEEIFRTGSIQDY
NVDLSSGGEKTNAFMSFNYRKQEGTLLNTGLDRYNFRLNTDHQLKPWFKLGQNLSYTSLA
GNGANTNDGYTGAILAAMYYTPSVTVRDKNGNYSGLPLDFAGDYGDTVNPVAELERINFR
RPVHTLLINPYLEIKINPHLKFRSNLSLNQSFINNKDVKVQRPEIGKPDFRNGVGYRTNY
LKTLLSEQILTYDRSFGKHNISLTGLYSFQKDSGEGFGASIENFPQETPSFMYLQNGTGT
KITESFLEKRALTSAMVRLNYDYHSRYILSLIGRKDGTSLLPKQNRFENYYAISGAWNIA
QENFMTGSHFSTLKLRYSHGLTGNLGGLQNNVNAIYPLFTRFENIIFGENPTQNMAYYAS
ILGNPNLKWGKSQQNTLGIDIGISRDRFTMTVDYFHKKSLDQIMAKPLPSTSGYTEIYEN
VGTFLDTGFEVGVNFRNRTSNRFRYNINANFATLKNEILSMGESTEMQMNANMRRSLYPV
RNVVGQSMYSYYGYKTGGIFQSDAEVKAHIDSNGNLLQPNAKPGDLKFLKANSSTGALNP
KDDYVNLGNPFPKLTYAFTINLEYDNWDLSAFFQGVHGNKIFNALKFVTMNPVGAGQNYN
LDRDILNAWSPNNTATNIPRVVARDPNGNYSNVSDFYVEDGSFLRLRNFSIGYNVQSPAL
TSAGIKKLRIYASGTNLLTFTKYTGFDPEVGMDFLGIDQGRYPIAKNIILGVNISL
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaaagaaaactacagcaatttgctacctattaggattagctacatttccatct
cttgctttagcacaatctcatcaagatagtgtaaaaactaaagtgatagaggaagtaaca
ttggtgaatattggatacggtagaaaagaatttaaaaagacttcaggttccgtagctaaa
actaatttagacaatattgcagaccgctcagtagcgagtgtagcagacgtactacaagga
aaaacagctggagttatggttactggcgaaggaggagatcctacttcaatcccaaaagtt
acgattcgtggtctagggggtgttaatggagaagaaccactttatgttattgatggcgtg
ttatttgaaaaagccccttttataaacccaaatgatatagaatctatgaatgtggtaaaa
gatgctacggcggcagtttatggagctagagcatctggaggggttatctttattaccacc
aagaaaggtaaaaaagggcagctcaatatcaattttgatgtaaaacaaggtttccaacaa
gcttggcgaaaaaagaaggctttgaatgctgctgaattccaagacataatgactaaagca
taccaaaatgcaggacttgcagttcctagagcatttgatcccaccacaaatccagacggt
cgaatcactagaacagattggatagaagaaatctttagaacaggttctattcaagattac
aacgttgatttaagcagtggaggagaaaaaactaatgcctttatgagctttaattatcgt
aagcaagaaggtaccttattaaatactggcttagaccgttacaactttaggctgaataca
gaccatcaattaaaaccttggtttaagctgggacaaaatcttagttacactagtttggca
ggaaatggtgcaaacacaaatgatggctacactggagctattttagcggctatgtattat
accccaagcgttactgttagagataagaatggtaactatagcggacttcctttagatttt
gctggagattacggagacaccgtaaacccagttgcagaattagagcgtattaactttaga
agaccagtacacacactattaattaatccttatctagagataaaaataaatcctcattta
aaatttagatctaatttatcactaaatcaatcttttatcaataataaagatgttaaagtt
caaagaccagaaattggaaaacctgattttagaaatggtgttggatatagaaccaattat
ttaaaaacattactctccgaacaaattttaacttatgatagaagttttggcaaacataat
attagcttaactggtttatattccttccaaaaagattcaggagaaggctttggggcttct
atagagaattttccgcaagaaacaccatcatttatgtatctacaaaacggaacaggaaca
aaaattacagaaagtttcttggagaaaagggcattaacctctgcaatggtaagattaaac
tatgactatcattctcgttatattttatcattgataggtagaaaagatggcacctcacta
cttccaaaacaaaatagatttgaaaactactatgcaatttcaggagcatggaatatcgca
caggaaaactttatgactgggtctcattttagcacattaaaactgagatacagccacggt
ctgacaggaaatttaggtggactacaaaataatgttaacgccatctatcccctatttacc
agatttgaaaacattatttttggagagaatcctacacaaaacatggcttattatgctagt
attcttggaaatcctaatttaaaatggggaaaaagccaacaaaatactttagggatagat
attgggatatcgcgtgaccgctttacgatgaccgtagattattttcacaaaaagtctcta
gaccaaattatggcaaaaccgctacctagtacttctggatatacagaaatatatgagaat
gtgggaacatttctagatactggatttgaagttggagttaattttagaaatagaactagc
aatcgtttccgctataacatcaatgcgaattttgcaactctaaagaatgagatattatca
atgggagagtctaccgaaatgcaaatgaatgccaatatgcgtagatcactctaccctgta
agaaatgttgttgggcaatctatgtattcttactacggatataagacaggaggtattttc
cagtcagatgcagaagtaaaagcccatatagattccaacggaaacttattacaacctaat
gcaaaacctggtgatttaaaatttttaaaagccaatagttctactggagcactcaatcct
aaagatgactatgtaaacctaggtaatccttttcctaaattaacttatgcttttaccata
aatctagaatatgacaattgggatttatcagcatttttccaaggagtacacggaaacaaa
atctttaatgctctaaaatttgttactatgaacccagtaggagctggccaaaactataat
ttagacagagacatcctcaacgcatggtctccaaacaataccgcaaccaacattcctcgt
gtcgtagcaagagaccctaatggaaactactctaatgtttcggatttttatgtagaagat
ggctctttcttgcgtttgagaaattttagtattggttataatgtacaatcacctgctcta
acttctgctggtatcaaaaaattaagaatctatgcctctggcaccaaccttttaacgttt
acaaaatatacaggatttgatcccgaagtaggaatggatttcttgggaattgatcaggga
cgctaccctatagccaaaaatatcattctaggtgtaaacattagtctataa
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