Riemerella anatipestifer RA-GD: RIA_0552
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Entry
RIA_0552 CDS
T02007
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease components
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIA_0552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rar02000
]
RIA_0552
Transporters [BR:
rar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RIA_0552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Zeta_toxin
SMC_N
RsgA_GTPase
Pannexin_like
AAA_21
AAA_22
MMR_HSR1
AAA_23
AAA_29
DUF5906
DUF87
AAA_30
AAA_16
APS_kinase
ResIII
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
ADZ11717
LinkDB
All DBs
Position
complement(516829..518580)
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AA seq
583 aa
AA seq
DB search
MKKQTTGMLIKRLFFIGMNFRRWFLLALLVSIILAVVSTYRPILTKNIVDHDIMQLKSTT
LLMQSIYWLVGLVIAETILNFLLVFLSNYISQNVMRDIREKLYHKLIYFKTSFFDKTAIG
QLVTRAVGDVETIATVYTDGFLMVFGDVLRIVMVLVAMFNVNVQLSFVALAILPIMVLIT
RFFQKKLKQSFGDERQWTATQNSFVQERLSGMSIIQVFNRQDAEFEKFESINASLKKALL
KTVFYFSLFFPVVELITSLFIGLILFYAGYNALYNQNATPGEVIAFIQFVNMLIRPLRQI
ADRFNNIQRGLVGAERVLGIMDQDEAMPNEGKEIITDIKGEIDFKAVRFSYDDKQEVLKG
IDFKVNQGETVAIVGATGAGKSTIINLITRFYDVSSGQILLDGKDLRDYDLYSLRQHIGV
VLQDVFLFHGSIYENLTFGDETITLEQIKTIAKEIEVDDFIESLPNGYHYVVNERGASIS
LGQRQLLSFLRAYLSNPKILILDEATSSIDHESEKLIQKATEKITKNRTSIIIAHRLSTI
EKADKILVMDKGKIVEEGTHQELLALNGYYALLYQSQLGTKKE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaaactacaggaatgcttattaaacgcttatttttcatcggaatgaatttt
aggcgatggtttctgttggcgttattggtatctattatcttggcggtggtttctacctat
cgtcctattctcaccaaaaacattgttgaccacgatattatgcagctgaaaagcactacg
cttttgatgcagagtatctattggttagttggtttggtgattgcggagactattcttaat
tttttgttggtgtttttatccaattatatttctcaaaatgtgatgagagatataagagaa
aaactctaccataaactgatttatttcaagacttcattttttgataaaacggctattggg
caattagttactcgtgcagtgggagatgtagaaaccatagcaacggtctatacagatggc
tttctaatggtctttggagatgtgttaagaatagtgatggtgctggtagcgatgtttaat
gtgaatgttcagttgagttttgtggcgttagcgatattgccaattatggtactcatcact
cgcttttttcaaaagaaactcaaacaatcgtttggtgatgaaagacaatggacggcaacg
caaaattcattcgtacaagaacggctttcgggtatgtctattattcaagtatttaatagg
caagatgccgagtttgaaaagtttgaatccatcaatgcaagtcttaaaaaagcattacta
aagacagtattttatttttccttgttcttccctgtggtagaacttattacttcattgttc
attgggcttattttgttctatgcgggttataatgctttgtataatcaaaatgctacgcct
ggggaagtgatagcgtttatacagtttgtaaatatgctgataagaccgctacgccaaatt
gccgaccgttttaacaatatccaaagagggttggtaggagcagagagggttttgggtatt
atggatcaagacgaagcaatgcctaatgaagggaaagaaatcattacagatattaaagga
gagatagattttaaggcggtgcgtttctcttatgatgataaacaggaagtgcttaaaggg
attgattttaaagtaaatcaaggagaaactgtggcgattgtaggagctacaggggcaggg
aaatctactatcatcaatcttattactcgtttttatgatgtaagttctgggcaaatttta
ctagatggcaaagaccttagagattatgatttgtatagtttaagacaacatataggagta
gtattgcaagatgttttcttgtttcacggaagcatttacgaaaatttaaccttcggagac
gaaaccattactctggagcagattaaaaccatagcaaaagaaatagaggtggacgatttt
atagaaagtttgcctaatggctatcattatgtggtaaatgagcgaggagcgtctatttct
ttggggcaacgccaactactttcttttttaagggcgtatctttctaatcctaaaattctt
attcttgatgaagccacttcttccatagaccacgaaagtgaaaaattgattcaaaaagct
acggagaaaattactaaaaatagaacttctattatcattgctcacaggctttctaccata
gagaaggcggacaaaattctagtaatggataaaggtaaaatagtagaagaagggacacat
caggaattgttggctctcaatggttattatgctttgttgtaccaatctcaacttgggacg
aagaaagaatag
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