Riemerella anatipestifer RA-GD: RIA_0578
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Entry
RIA_0578 CDS
T02007
Name
(GenBank) TonB dependent receptor, putative
KO
K02014
iron complex outermembrane recepter protein
Organism
rar
Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rar02000
]
RIA_0578
Transporters [BR:
rar02000
]
Other transporters
Pores ion channels [TC:
1
]
RIA_0578
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ADZ11743
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All DBs
Position
complement(542629..545370)
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AA seq
913 aa
AA seq
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MKQSLRTKSYLITASALFFVGEGLYGQSRKDTVKTKQVEEVVLLGSRSGARSKTDSPVPV
DVFDVQKMGVTLPQTNINQILNVVAPSFTSTVQTGADGTDHLDPAQLRGLGPDQVLVLVN
GKRRHTSALINVNGTPGRGTVGTDLNAIPAFALSKIEVLRDGASAQYGSDAIAGVMNLNL
KRNTGKLEGQLSFGANPSNASNNHTKGIDGETFQVDLNYGNKIGSKGGFYNLTWSSQFRN
PTYRANEEEGKIFNAYNAIERRAAEGGVNLSSLFTNINTTPNQQQLVDYIHNYAQKVAYF
APDFQNKIQSANSISALQKILSEDVTNQELAYRGLNRKDFNMLVGQSKLSTHQFFANIEV
PLNDEWKVYTFGGYGFRNGTSGGFYRRPNQSRTFTGFNLDGFLPNINTNIEDLSLAAGIK
GNLGAWQVDLSNTFGQNSFDYNVRNSGNTSLRFNSPNEFNAGGLRFLQNTLNLDVYRNYD
VWAGLNLAFGAEQRTENFKIREGEPASYLSYDVFGNPQTAQTPNSQKPTDFFGNTLPGGS
QVFGGFRAENAGSNGRSSYAFYADVEANFTKRFLVAAATRFENYSDFGSTLNYKLASRIK
ATDNLNFRLAGSTGFRAPSVHQIYYNTTSTLFLNGQLQEVGTFNNHSRIANLLGIPKLKQ
ETSQSVSAGFTYRIPIARLSITGDAYFTRINNRVVLTDTFKAGANTELQNLFAQANVNAA
QFFANAIDTETKGLDVVISHDFKNNDFKLTNDFALNLSQTRRVGEIHSSPVLKAAGLDET
YFSERSRIYVEEAIPRFKAGLSHTLSYKKLNVYLRNSYFGKVTGADVVDANGDGITLPNE
HQIMTDRVVTDLSIGYAFSPKITFTLGANNLFDVYPSRNLPASTSNGQFVYTRATSQFGL
NGRYVFSRLSFNF
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtcattacgaacaaaatcttacctcattacagcctcggcgttgttttttgtg
ggagaaggactttacggacaaagcagaaaggatactgtaaagaccaaacaagtagaagaa
gtagtactactagggagccgttctggagctcgttctaaaacggatagccccgtgccagta
gatgtgtttgatgttcaaaaaatgggggttacattgcctcaaaccaatatcaaccaaata
ctgaatgtggtagccccatcatttacttccaccgtacagacgggagctgatggtacagac
cacctagaccctgcacagcttagaggcttaggtccagaccaggtcttggtattagttaat
ggtaaaaggaggcatacctctgccctcatcaatgttaatgggacaccagggagaggtacc
gtaggtaccgacctcaacgccataccagcctttgcacttagcaaaatagaagtgcttaga
gatggtgcttcggcacaatatggctctgatgctattgcaggggtaatgaacctcaatctt
aaaagaaatacaggcaaactagaagggcaactctccttcggagctaatccgagcaacgcc
tctaataaccacaccaaagggatagatggggaaacctttcaggtagatttaaactacggt
aataagataggttctaaaggtggtttctataaccttacttggtcatctcaattcagaaat
cctacctatcgtgccaatgaggaagaaggtaaaatctttaacgcctataatgctatagaa
cgaagagcggcagagggaggcgttaatctatcctcactattcacgaatatcaataccacg
cccaaccagcagcagttggtagattatattcataattatgcccaaaaggtagcctacttt
gcaccagattttcagaacaagatacagtctgccaacagcattagtgctttgcagaaaata
ctctcggaagacgttaccaaccaagaattagcgtatcgagggcttaaccgaaaagatttt
aatatgctcgtggggcaatctaaactaagcactcaccagttttttgccaacatagaagtc
ccattgaatgacgaatggaaggtctatacctttgggggatatggcttcagaaacgggact
tcaggaggcttctaccgaagacccaaccaatccagaacctttacagggtttaatcttgat
ggcttcttacctaatatcaataccaatatagaagacctctcgctagcggcaggtatcaaa
gggaatttaggagcgtggcaagtagatttgagcaatacttttgggcagaacagttttgat
tataatgtaagaaactctggcaatacctcgttgaggttcaactctccaaatgaatttaat
gctggaggattgcgtttccttcaaaacacgcttaatttagatgtttataggaattatgat
gtttgggcagggcttaatctggcttttggagcagagcagagaaccgaaaactttaaaatt
agagaaggcgagccagcttcttatctttcctatgatgtgtttggtaacccacaaacggca
caaacgcccaatagccaaaaaccaacggatttctttgggaatactctacctggtggctca
caagtatttggtggcttccgtgcagagaatgcaggtagtaatggtaggagctcctacgca
ttctatgccgatgtagaagctaactttaccaaaaggtttctagttgcagcagctactcgc
tttgaaaattattcggattttgggtctacactaaactacaagttagcttccagaataaaa
gcaacggataatcttaatttccgtctagcaggttctactggatttagagctccatctgta
caccagatttattacaataccacttctacacttttccttaatgggcaactgcaagaggta
gggacttttaacaatcactctagaatagccaatctgttagggattcctaaacttaagcaa
gagacttctcaatctgtaagtgcaggatttacttatcgtattcctattgcaagattaagc
attacaggagatgcctactttacgcgtatcaacaatagagtggtgcttacggataccttc
aaagcaggagccaatacagaactgcaaaatctatttgcacaagctaatgtaaatgcggca
cagttttttgctaatgccatagacacagaaactaaagggctagatgtggtgataagccac
gattttaaaaataatgattttaaactaactaatgattttgctcttaaccttagccaaaca
agaagagtaggagagatacattcttcaccagtgcttaaagcagcaggtttagacgagact
tatttctccgagcgttctagaatttacgtagaagaagctattcctagattcaaggcgggg
ctttctcatacccttagttacaaaaaactgaatgtttatttaagaaatagctatttcgga
aaagtaacaggagctgatgttgtagatgcaaatggcgatggtattacgttgcctaacgag
caccaaataatgacggatagagtagttacagatttatctattggatatgctttttctcct
aaaattacctttacactaggagccaacaacctatttgatgtttatcctagccgaaatctt
cctgcttctaccagtaatggacagtttgtttacacacgagcgacctcacagtttgggctc
aacggaagatatgtgttttctagattaagctttaacttttaa
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