Riemerella anatipestifer RA-GD: RIA_0630
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Entry
RIA_0630 CDS
T02007
Name
(GenBank) Glycoside hydrolase, family 5, conserved site
Organism
rar
Riemerella anatipestifer RA-GD
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Gene cluster
GFIT
Motif
Pfam:
DUF4953
DUF5117
DUF5118
Reprolysin_5
Reprolysin_2
Peptidase_M10
Reprolysin_4
Imm43
OATP
Reprolysin_3
Motif
Other DBs
NCBI-ProteinID:
ADZ11791
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Position
complement(606965..609556)
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AA seq
863 aa
AA seq
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MKNRYWFMNLKILGCSAWLFLYPNMAFPQSKVSSKDSVKTEKEDSKKNESFESYEKLLKG
AETKQGLLKIHRIKDKIYFEIPNEVLGKDLLIVNKISSVPAPINNAGINKGMNYENKIIR
FYKDTTNKKVWVKTFDPQITVNSQDNISASVKDNYGESIVEGFEIKTLGKDSTAVIQVNN
VFDGNAKSFNNLFDNIGMGGSVRTKDSYIDEVKAFPNNVVVKSYFSTQISEGKTSAEKAD
LTVGTTTNIVLLPEPMVGRFSDDRVGYFTTPKMYFTDSQQKVEQRELITRWRLEPKAEDE
AKYLRGELVEPKKPIVYYIDPATPKQWQQAIIDGVHDWNKAFEKAGFKNVISAKLPDPND
TEFDVDDVRYSVITYAASSMANAMGPSVVDPRTGEILESDIIWWHNVMTLLQSWMRVQTG
IIDPQVRGNKFPDDKMANAIRFVSSHEVGHTFGLKHNMGSSFAFPVESLRSPEFTEKMGG
TAPSIMDYARFNYVAQEGDGVKQITPKIGVYDEFAINWGYRWTGKKTPQEELPITQKWIE
KHQGDPLYFYGAQQEETVDPRSQAEDLGDNAMKAGEYGIINLKKTLPNLIEWSTKNGENY
NEAKSFYNQVINQWYVYNNHVLANIGGIYLNPTVKGDQQSSYIPVPYETQKEALAFIKKH
ILTLPEWLFLSPLNQKIRPAKNTPKGLVEQSPYNVFREKQAAILYGLMNDNKLLRILEFE
FLNHQKVMTVAELFNDLREFIFSKSIKKQPLNIAERMTQKNYIDALIIDTQRMYEKTEKG
IFSPMPMMCDYACSHTHLDKADERNLEFYFDGMKRLSEVGSAKRAELIKVRAIISKAVNK
ADNDTQSHYQDMMVRLNKALGNN
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatagatattggtttatgaatttaaagattttaggttgttctgcgtggttgttt
ttgtatccaaatatggcttttcctcaaagcaaagtttcgtcaaaagattctgtgaaaaca
gagaaagaagattctaaaaaaaatgagagctttgagtcttacgaaaagttattgaaagga
gcagaaaccaaacaagggctactcaaaatacatagaataaaggataagatttattttgaa
attcctaacgaggtgctagggaaagacctactcatcgtaaataaaatatcgtctgtaccc
gctcccatcaataatgctggaattaacaaggggatgaactatgagaataaaatcatcaga
ttttataaagacactaccaataaaaaggtatgggtaaaaactttcgacccacaaattacc
gttaattcgcaagataatatttcggcttcggtaaaggataattacggagagtctatagtg
gaaggttttgaaattaaaactctagggaaagactccacagcggtaattcaggtaaataat
gtctttgacggaaacgccaaaagttttaacaatctgtttgataatatcggtatgggtggc
agtgtaagaaccaaagattcttacatagacgaggtaaaggcttttcctaataatgtggta
gtaaagtcttatttcagtacccaaatttcagaggggaaaacttctgccgaaaaagccgat
ttaacggtggggactaccactaatattgtgctattgccagagcctatggtagggcgtttt
tcggacgatagagtagggtattttacgacccccaagatgtactttacggatagtcagcag
aaggtagaacagagagaactcattaccagatggcgactagaacctaaagcggaagacgaa
gcaaaataccttagaggcgagctggtagaacctaaaaaaccgattgtttattacatagac
ccagctacaccgaaacaatggcaacaagccattatagatggagtgcacgattggaataaa
gcatttgaaaaggctgggttcaaaaatgtaatttcagcgaaattgccagaccctaacgat
acagagtttgatgtagatgatgtccgctattctgtaattacttatgcagcctcctctatg
gcgaatgctatgggcccatcggtagtggaccctagaacgggggaaatcttggagtctgat
attatatggtggcacaatgtgatgactttactccaatcttggatgagagttcaaacagga
attatagacccacaggtaagaggaaataaattcccagacgataagatggcgaatgccatt
cggttcgtgtcctcgcacgaggtagggcatacttttgggcttaaacataatatggggtct
tcgtttgcattcccagtagagtctttgcgttcgcctgaatttacggagaaaatgggaggt
acagctccttctattatggactatgctagatttaactatgtggcacaagaaggtgatggc
gtgaaacaaatcactccgaaaataggagtttatgatgagtttgccattaactggggttac
cgttggacgggtaaaaagacgcctcaagaagaattgccaatcacgcaaaaatggatagag
aaacatcaaggagacccactctacttctatggagcacagcaagaggagacggtagaccct
cgctcgcaagcagaagatttgggcgataatgcgatgaaagcaggggagtatggcatcatc
aatctaaagaaaacgctaccaaacctcatagaatggagtaccaaaaatggagaaaactac
aacgaagcgaagtctttttacaatcaagtgattaaccaatggtatgtttataacaatcac
gtgttggctaatattggggggatttaccttaatcctaccgttaagggcgaccagcagagt
tcttatatacctgtaccatacgaaacacaaaaagaggctttggcgtttataaaaaaacat
atactgactttgccagagtggttatttttatctccattgaaccaaaaaatccgtccagct
aaaaacacacctaaagggttggtggagcagtcgccatacaatgtatttagagagaaacaa
gccgctattttgtacgggcttatgaatgataataagctcctaagaatattagaatttgag
tttcttaatcatcaaaaagtgatgacggtagctgaattgttcaacgatttaagagaattt
atttttagtaaatcaattaaaaaacagcctttgaatatcgctgagagaatgacgcaaaaa
aactacatagatgctctcattatagatacgcagagaatgtacgagaaaacggaaaagggc
atctttagcccaatgccaatgatgtgcgactatgcttgtagccacactcatttggataaa
gcggacgaacggaacttagaattttattttgatggaatgaaacgattgtcggaagtaggt
tctgccaaaagagcggagttgataaaggtacgagcaatcatctcaaaagcagtgaacaaa
gccgataacgatacacaaagtcattatcaagatatgatggtaagattaaataaagcattg
ggtaataactga
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