Riemerella anatipestifer RA-GD: RIA_0632
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Entry
RIA_0632 CDS
T02007
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rar
Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rar03032
]
RIA_0632
03036 Chromosome and associated proteins [BR:
rar03036
]
RIA_0632
03400 DNA repair and recombination proteins [BR:
rar03400
]
RIA_0632
DNA replication proteins [BR:
rar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RIA_0632
Chromosome and associated proteins [BR:
rar03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RIA_0632
DNA repair and recombination proteins [BR:
rar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RIA_0632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
COMMD9_HN
Motif
Other DBs
NCBI-ProteinID:
ADZ11793
LinkDB
All DBs
Position
complement(611466..611759)
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AA seq
97 aa
AA seq
DB search
MTKAELVNTISNKLGIEKNDTQKVIEAFMQEIRGSLYEGNNVYLRGFGSFIIKTRAAKTG
RNISKNTAIEIPAHNIPAFKPSKSFAERVKTKVPVKD
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcagaattggtaaataccatatctaacaagttgggtattgagaagaatgac
acgcagaaagtaatagaggcttttatgcaagagataagaggttctctttatgaaggtaac
aatgtttacttaagaggttttggctctttcattattaagactcgtgctgctaaaacagga
agaaatatctctaaaaatacagcgatagaaattcctgcacataatattccagcgtttaaa
ccatctaaatcttttgcagaaagagtaaaaactaaagttccagtaaaggattaa
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