Riemerella anatipestifer RA-GD: RIA_0733
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Entry
RIA_0733 CDS
T02007
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease components
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIA_0733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rar02000
]
RIA_0733
Enzymes [BR:
rar01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
RIA_0733
Transporters [BR:
rar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RIA_0733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA
AAA_22
AAA_24
RsgA_GTPase
nSTAND3
AAA_18
AAA_25
APS_kinase
AAA_5
AAA_16
DEAD
TsaE
AAA_15
AAA_21
AAA_29
AAA_30
AAA_14
RuvB_N
SRP54
NACHT
Motif
Other DBs
NCBI-ProteinID:
ADZ11876
LinkDB
All DBs
Position
710090..711925
Genome browser
AA seq
611 aa
AA seq
DB search
MKPLHRILSFAKPHQKYLWGSMFFNILYSVLQIFSVLSMLPVLRIILRLDKIDTTKEPFY
DGNISNYFGYLKDLVYYKIQIYNDIYGGSTVLAWVCVITGVAFLLRNISRYLGSFLLVNY
RVGITKDLRSAIYHKFLKLPVSFFTEQRKGDMMSRISNDVGAIESGIMGALVDIVNAPFM
IIFSLTALFLLDAQLTLFSLIVFPIMGWLISWVGKSLKRQANSAQEELGNLFSLVDETLK
SSKVIKIFNADKILKKRFDTTTTLWQKYAIGMSRRRELASPMSEFLGSITMLLIAWFSGI
SVINGTNNDPATFLIFLGIFYQILAPAKQLSNAVSSIQGGMASLERVSEVLDYDLKVEET
ANPIAIDNLNHSIEFKNISFFYDQDHKILENFSMSLPKGKTVALVGQSGSGKTTVANLLA
RFYDVNNGSIEVDGNNIKDLKLKDYRSLLGMVTQESVLFNDTVYNNILMGKPDASKEEVI
AAAKIANAHQFIESLSAGYNTNIGDDGNKLSGGQKQRISIARAVLKNPPVMILDEATSAL
DTESERAVQDALDKMMENRTSLIIAHRLSTIQKADLILVMEKGKVIEQGNHNDLMARNGV
YKKLVELQNFD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttacatagaattttaagcttcgccaaaccacaccaaaagtacctttgggga
agtatgttttttaatattttgtactctgtacttcagatattttcggtgctttctatgctc
cctgttttaaggattatcctaaggttagataaaatagacactaccaaagagcccttctat
gacggtaacattagtaattattttggctacttaaaagatttggtctattataaaatacag
atatataacgatatttatggcggcagcaccgtgctggcgtgggtatgtgtgattacaggg
gtagcgtttttgcttcgtaatatctctagataccttgggtcttttctccttgtaaactac
cgtgtggggattactaaagatttaagaagtgccatctatcacaaatttctaaaactcccc
gtatcgttcttcacagaacaaaggaagggcgatatgatgtctagaatctctaacgatgtc
ggtgctatagaaagtggtattatgggagcattagtagatattgtgaatgctccattcatg
attattttttcgctcaccgccttgtttttactagatgcccagcttacgctgttttcactc
atcgtcttccctattatggggtggttgatttcgtgggttggtaaaagtttaaaaagacaa
gctaactcggcacaagaagaactaggcaacctattctctttagtagatgaaaccttaaaa
tcttccaaagtcatcaaaatctttaatgcggataaaatcctaaagaaaagatttgacacc
accaccaccctttggcaaaaatacgccataggtatgagccgaagacgagagctcgcctct
ccaatgagtgagtttttggggtctatcacgatgttacttatcgcttggttttcgggcatc
agtgttatcaacgggactaataacgacccagctactttccttattttcttggggattttc
tatcaaatccttgcgcctgccaaacaactatctaacgccgtatcgtctatacaaggcgga
atggcaagtctggagagagtttcggaagttttagattatgatttaaaggtggaagaaact
gccaatcctatcgctattgataatctcaaccacagcattgagtttaaaaacatcagcttt
ttctacgaccaagaccataagattctagaaaacttctctatgtctttaccaaaagggaaa
accgtggcattggtgggacagtctggaagtggtaaaactaccgtcgccaacctcttggca
aggttctacgatgtcaataacgggagtatagaggtagatggcaacaacatcaaagattta
aaactaaaagactaccgaagtctgctaggaatggttacgcaagagtcggtattgtttaac
gatacagtctataataatatcttaatgggtaaaccagatgcttccaaagaagaagtcatc
gctgcggctaaaatagccaacgcacaccaatttatagaaagcctttctgcagggtacaac
accaatataggcgatgatggcaataaattatcaggaggacaaaagcaaagaatatccatc
gcaagagcggtactcaaaaatccacccgtgatgattttagatgaagctacctctgcccta
gacaccgaaagcgaaagagccgtgcaagatgccttagacaaaatgatggagaacagaact
tcgctcatcattgcccaccgactgtccaccatacaaaaagccgacttaatcctagtaatg
gaaaaaggcaaggtgatagaacaaggcaaccacaacgacttaatggctagaaatggcgtt
tacaaaaagctagtagagctacaaaactttgattaa
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