Riemerella anatipestifer RA-GD: RIA_0835
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Entry
RIA_0835 CDS
T02007
Name
(GenBank) Isopropylmalate/homocitrate/citramalate synthase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00280
Valine, leucine and isoleucine degradation
rar00650
Butanoate metabolism
rar00907
Pinene, camphor and geraniol degradation
rar01100
Metabolic pathways
rar01120
Microbial metabolism in diverse environments
rar04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RIA_0835
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RIA_0835
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RIA_0835
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RIA_0835
Enzymes [BR:
rar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RIA_0835
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
ADZ11974
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Position
complement(809163..810011)
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AA seq
282 aa
AA seq
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MFLTECPRDAMQGWSEFIPTDTKINYLNSLMEVGFDVLDCGSFVSPKAIPQMADSGEVLD
NIDKSLSDTKLSVIVANITGAEKALSHANVDILGFPFSISETFQFRNTNKDQEEAFNQVK
TILEMVKSEKKTLNLYFSMAFGNPYGEDWKWEDVAFWANRFSEIGVRNILLSDTTGVATA
ESIALLFDKIPANHPDISFGAHFHNRYEDSYIKLKAAYDKGCRRFDSAIKGIGGCPMAKD
DLVGNMPTEQLFNFMNLEKIEIKQNMLHFESAWNIAKSIFHF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtttctaacagaatgtccgcgtgatgccatgcaaggttggagtgagtttattccaaca
gatacaaaaatcaattaccttaatagtttaatggaggtagggtttgatgtattggattgt
ggtagctttgtttctcctaaagccattccgcaaatggcagactctggggaagtgttggat
aatatagataaatctttatcagatactaaactctccgttattgtagccaacataacaggt
gcagaaaaggcactttctcatgccaatgtagacattttgggatttcctttttctatatcc
gaaacctttcagtttagaaacaccaacaaagatcaagaagaagcattcaatcaggtaaaa
accattttagaaatggtaaagtctgagaaaaaaacacttaacctctacttttctatggca
tttggtaatccatacggagaagattggaaatgggaagatgttgccttttgggcgaaccga
ttttcggaaataggagtcagaaatatattactttcagatactacaggggtagccactgcg
gaaagtatagctcttttatttgataaaattcctgctaatcatcctgatattagttttggt
gctcattttcataacaggtatgaagattcttacattaaactaaaggctgcgtatgataaa
ggctgtagacgatttgattcagctataaaagggataggcggttgcccaatggctaaagat
gaccttgtggggaatatgcctacggaacagcttttcaactttatgaatttagaaaagata
gagattaagcagaatatgctccattttgaatccgcatggaatattgccaaatctattttc
catttttaa
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