Riemerella anatipestifer RA-GD: RIA_0856
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Entry
RIA_0856 CDS
T02007
Name
(GenBank) glycosyl transferase family protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00540
Lipopolysaccharide biosynthesis
rar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RIA_0856
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rar01005
]
RIA_0856
Enzymes [BR:
rar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
RIA_0856
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
RIA_0856
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
RIA_0856
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
RIA_0856
Lipopolysaccharide biosynthesis proteins [BR:
rar01005
]
Lipid A
RIA_0856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
ICL
Motif
Other DBs
NCBI-ProteinID:
ADZ11991
LinkDB
All DBs
Position
complement(827752..828894)
Genome browser
AA seq
380 aa
AA seq
DB search
MGGTKKSNTIVKNAFSPNDKVIWMHAASLGEYEQGLPVLEGLKKKYPDYKVLVTFFSPSG
YENVIKKKTIADAICYLPFDTRKGVASFLNHFQVEFFFTVKYDYWYNLLSELKQKHVKTF
VVSALFYPSQVFFKPYGKWMVAELKKNIDWFFHQTKDSLALAQGIGLSQSSLSGDTRYDR
VKATKANFEEIPLIKKFKDQSLLLVFGSSWEAEEIIAEKVTKVNNEVKLIIAPHDLKRVS
ILKKKFPQALLYTELNEQELENNKENNILIINTIGLLSRIYAYADITVVGGGFHSAGLHN
ILESAVFGNPVLFGDKYRKNPEADALIEYGGGSFFSTPEEVVQFIQSLILDESLRARMAN
NAEVFISNQPKATEHILSKF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
ttgggagggacaaaaaaaagcaatactattgttaaaaatgccttttctccaaacgataaa
gtgatttggatgcacgccgctagtctaggtgaatacgagcaaggcttacctgtattggaa
ggattaaagaaaaaatatcccgattataaagtattggttacctttttttctccttctggt
tacgaaaatgtaattaaaaagaaaactatcgcagatgccatttgttatttaccttttgac
actagaaagggagtagcctcttttttaaatcatttccaagtggagtttttctttactgta
aagtacgactattggtacaatctacttagtgaacttaagcaaaagcatgtaaaaactttc
gtggtttcggcattattttatccatctcaagtgttttttaaaccttatggaaaatggatg
gtggcggaattaaaaaagaatatagattggtttttccatcagactaaagattcgttggct
ttagctcaggggataggtttatctcaatcatctctttcaggggacactcgttacgataga
gtaaaggcgactaaagctaattttgaagaaataccattgattaaaaagttcaaagaccaa
agcctattactcgttttcggaagctcttgggaagccgaagaaatcatcgctgaaaaggtt
acaaaagttaacaatgaagttaaactcatcatcgccccacacgatttaaaacgagtgtct
atacttaagaaaaagtttcctcaagcattgttatatacagaactaaatgagcaagagtta
gagaacaataaagaaaataatatccttattataaatactatagggctactttctagaatt
tatgcttatgcggatataacggtggtgggcggcggttttcatagtgcggggctgcacaat
attttggaatcggctgtttttggaaatcctgttttgttcggagataaatatcgtaaaaac
ccagaagccgacgcacttattgagtatggaggaggtagttttttttctactccagaagag
gtggttcaatttattcaatctttaattttagatgaatctttgagggcaagaatggctaat
aatgcagaagttttcatctctaatcagcctaaagctacggaacatatcctgtctaaattt
taa
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