Riemerella anatipestifer RA-GD: RIA_0897
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Entry
RIA_0897 CDS
T02007
Name
(GenBank) ATPase involved in DNA repair
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
rar
Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rar03400
]
RIA_0897
DNA repair and recombination proteins [BR:
rar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RIA_0897
TLS (translesion DNA synthesis) factors
Other SOS response factors
RIA_0897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_22
ABC_tran
AAA_29
Fez1
Bul1_C
DUF5564
Spectrin_Anc-1
DUF489
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
ADZ12030
LinkDB
All DBs
Position
complement(868474..870123)
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AA seq
549 aa
AA seq
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MLNKIYIQNFALIDKLSLNLNKGLQVITGETGAGKSIILGALRLILGERADLKAVADAEQ
KSVVEAEFEVSNDLKSFFDENDLDFENLTIIRREILPSGKSRAFVNDVPVTLDVLKNLSS
RLVDIHSQFETSLLFTEAYQFKIIDGIAQNQSILAEYQKTFSAYQNLKKDLENAQNQLSE
GLKERDYKSFLLQELEELALDKIDFEEVKNQLNTQENAEFISENLAAVISRFHQEEIGVL
DALADAKTKLYRVSEASSQFDEVSQRLDSVFEEFKDIVSEVENQVEKIEMNPHLLSELTT
IVNKINTLFVKHQVDTVEDLLAIKNKLSEEQNSFDTLEQRIGDITQKLEQSLTQLETLSK
ELSSTRVNASLVFKDKIEQLLKQLGLEKAKIEVSFSEVETFNSFGKESINILFQANTGFP
LKPIQSAISGGERSRVMLSVKKIMAETTALPTLILDEIDTGVSGRVAEEIGKVMKEMAKD
MQLIVITHLAQVAAKGHHNYKVVKSEVEGRTQSRIISLSEDEKLHEIAQILSGAKITDAA
LEQAKELMK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgctaaataaaatttacatacaaaattttgcccttatagataaattgagtttaaatctt
aataagggtttgcaggtcattacaggagaaacgggagctggtaaatctattattttagga
gctttaaggctgattcttggcgagagagctgacttgaaagcagtggcagatgcagaacaa
aaaagtgttgtagaggctgagtttgaagtttctaacgacttaaaatccttttttgatgag
aatgatttagactttgaaaatctcaccatcattaggagagaaattctcccaagtggcaaa
tctagggcttttgtgaacgatgtccctgtaacattagatgttcttaaaaatttgtcatct
aggttggtagatatacattcgcagtttgaaacttcgttgttatttacggaggcttatcag
tttaagattatagatggcattgcacaaaatcagtctattttagcagaatatcaaaagact
ttttcggcttatcagaatttaaagaaggatttagaaaacgctcaaaatcagttatcagaa
gggcttaaagagcgagattataaatcttttctactccaagaattagaagaattagcctta
gataagatagattttgaagaggttaaaaatcagctgaatacacaagaaaatgcggagttt
atatcggagaatttagctgcggtgatttctcgttttcatcaagaggagattggggtatta
gatgctttagcggacgctaaaacgaaactgtatagagtatcggaggcttcctctcaattt
gatgaggttagtcagcgtttagattctgtgtttgaggagtttaaagatattgtaagcgaa
gtagaaaatcaggtagaaaaaatagaaatgaatccacatttactatctgaacttacaacg
atagttaataaaatcaatacactatttgtaaagcaccaagtagatacagtggaggattta
ctagctattaaaaataaactgtccgaagagcaaaatagctttgatacattagagcagagg
ataggtgatattactcaaaaattggaacaatctttaactcagttagaaactttgtcaaaa
gaattgtcttcaactagagttaatgccagtcttgtgtttaaagataaaatagagcagcta
ctgaaacagttaggtctagagaaagcaaaaatagaagttagtttttcggaggtagaaaca
tttaattcctttgggaaagagagcatcaatattttatttcaagccaacacggggtttccg
cttaaacctatacagtccgcaatttctggcggagagcgttctagagtgatgctaagtgtt
aagaaaataatggcggaaacgacagctttaccaactttaattcttgatgaaatagataca
ggcgtttctggaagagtggcagaggaaataggaaaggtgatgaaagaaatggctaaagat
atgcaattgatagtgattacccatttggcacaggtagcggctaaaggacaccataattac
aaagtggttaaaagcgaggtggaaggcagaacgcagtctagaattatctcgttatcagaa
gatgaaaaactacacgagatagcccaaatcttatcaggagccaagattacagacgctgct
ctagaacaggctaaggagctgatgaaataa
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