Riemerella anatipestifer RA-GD: RIA_0899
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Entry
RIA_0899 CDS
T02007
Name
(GenBank) Predicted ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rar
Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rar03400
]
RIA_0899
DNA repair and recombination proteins [BR:
rar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RIA_0899
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
ResIII
AAA_10
AAA
FtsK_SpoIIIE
AAA_16
AAA_7
AAA_19
Zot
AAA_30
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
ADZ12032
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Position
complement(871544..873169)
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AA seq
541 aa
AA seq
DB search
MRLFKIDKRAIIQFYFLILSIKKCKMADKTKFIEELSSRYSSKGDSIILGKGMLDGEVIK
EVDVKLPLKTLNRHGLIAGATGTGKTKTIQVFVEQLSHAGIPSLVMDIKGDFSGIAEAGE
ENNIIKERYAKTELPYKAQPFPVELMTISGAKGVQLRATVTEFGPVLLSKILGLNDTQSS
IMSIVFKYCDDKGLPLIDLEDIKKVLQYVTTDDNGKKEIAENYGSIAPASLGAILRSIVA
LEQEGATAFFGEPSFEVNDLLQTRDGKGVVNIMRVDDIQNKPNLFSTFMLSLFAEIYLTF
PEEGDSGKPKLVLFIDEAHLIFKEASKTLLSQIETMVKLIRSKGVGIYFITQIPGDVPEN
VLSQLGLKIQHALRGFTAKDRKEIEKAIQNYPVTEYYKAEELIQNLGIGEAFVTALDEKG
IPTPLVQTYLISPESRMGVLTATEIDNLTAGSALVKKYQNSIDKESAYEILSKRMVPVAD
GSQTVQEAPKTTVTKEQEEPSIFDTVLKSPMAKTFGTTLMREGAKAILGMLGLKSTSRRR
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagattatttaagatagataaaagagctattattcagttttatttcttaattttatcc
atcaaaaaatgtaaaatggcagacaaaactaaatttatagaagaactaagcagtagatat
agctccaaaggagatagtattatcctagggaagggaatgctagatggagaggtaataaaa
gaggtagatgtaaaacttccgttaaaaaccttaaaccgtcatggtcttatagctggggct
acaggaacgggaaaaacgaagactatacaggtctttgtggagcagctttctcatgcaggg
ataccgtctttagtaatggatattaaaggtgatttttcaggaatagcagaggcaggggag
gaaaataacatcattaaagaacgctatgctaaaacagagttgccgtataaagctcagcct
tttccggtagagttaatgacgatttctggggctaaaggtgttcagttgagggctacggtt
acagaatttggaccagtgctacttagtaaaatattggggcttaatgatacccaaagtagc
attatgtctatagtctttaaatattgtgatgataaaggcttacctctaattgatttagaa
gatattaaaaaagtattacagtatgtaactacggacgataatggtaagaaagaaatagca
gaaaattacggctctattgcaccagcatctttaggggctattttgaggtctattgtagct
ttagaacaagagggagcaacagcgttctttggtgagccgagctttgaggttaatgatttg
ttacaaactagagatgggaaaggtgtggtaaatattatgcgtgtagatgacattcagaat
aaaccgaacttattttctacttttatgctgtctttgtttgccgagatttatcttactttc
ccagaagaaggcgatagtgggaaaccgaaattggtgctttttatagatgaagctcactta
atttttaaagaagcctccaaaaccttgctttcacagatagaaactatggtgaaacttatc
cgttctaaaggagttggtatttattttattactcaaatccctggagatgtgccagagaat
gttttaagtcagttaggtcttaagattcagcatgcattgagaggatttacagctaaagat
agaaaagaaatagaaaaagccatacaaaactatcctgttacagagtattataaagctgaa
gaactcatccaaaatttaggaataggagaggcgtttgtaactgcgttggacgagaaaggt
atcccgacccctttggtacagacttaccttatttcgccagaaagtagaatgggagtatta
acggctactgagatagataatctaacggcagggtcagctttagttaagaaatatcagaat
agtatagataaagaaagtgcttacgagattttatctaaaagaatggttcctgtagctgat
ggaagtcagactgttcaagaagcacctaaaacaaccgtgactaaagaacaagaagaacct
agcatatttgacactgtattgaaaagtcctatggctaaaacttttggtacaactctaatg
agagaaggagcaaaagccatactaggtatgcttggattaaaatccacttctaggagaagg
tactaa
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