Riemerella anatipestifer RA-GD: RIA_0914
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Entry
RIA_0914 CDS
T02007
Name
(GenBank) Transcription elongation factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
rar
Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rar03021
]
RIA_0914
03009 Ribosome biogenesis [BR:
rar03009
]
RIA_0914
Transcription machinery [BR:
rar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
RIA_0914
Ribosome biogenesis [BR:
rar03009
]
Prokaryotic type
rRNA transcription factors
RIA_0914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ADZ12047
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All DBs
Position
complement(892090..893325)
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AA seq
411 aa
AA seq
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MDNLALIEAFGDFKEEKNISKIDLMAIIEDSLKTLLRKRYDSDDHFDVIVNPDKGDFQIF
LNKTIVEDQMSEDDDLEIEISEARKTDPTFEVGEEFTQEIKVSQLGRRNILTLKQILATK
IQEHHNAYLYEQFKDRIGEIMVGEVHHIRFKHVILLDDEGNEYILPKDKQIPSDFFRKGD
NVRAVIESVDFKGSKPQITISRISPKFLERLLELEIPEIQDGTIILKKVVRIPGEKAKIA
VDAYDDRIDPVGACVGVKGSRIHGVVRELRNENIDVIQWSKNPEILVKRALGNVTINKID
INAEESKALVYTPSEEIAKIIGKQGQNIKLASWLSDYEIDVYREAHEDDDVELDEFSDEI
EDWVIETFKKVGLDTAKSIIDKDTEALVRLTDLEEETIEEVKRILAEEFND
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggataatttagctttgatagaagcgtttggggattttaaagaagagaagaatatcagt
aagattgatttgatggcaatcatagaagattctcttaaaacccttctaaggaaaagatat
gattctgatgatcattttgatgtgattgtaaatccagataagggagattttcaaattttt
cttaacaagactattgtagaagaccaaatgtcagaagatgatgatttggaaatagaaatt
tcggaagctagaaaaacagatcctacttttgaggtaggggaagagtttactcaagaaatt
aaagtatctcaactggggagaagaaatatcttaacgcttaagcaaattttagcaactaaa
atacaggagcatcacaatgcttacttatatgaacaattcaaggatagaattggggaaatt
atggtgggagaagttcatcatatccgtttcaagcatgtgatattattagatgatgagggc
aacgaatatattttgccaaaagataagcagataccttcagatttctttagaaaaggagat
aatgtgagagctgtgatagaaagtgttgattttaaaggaagtaagcctcaaatcacgatt
tctagaatatcgcctaagttcttagagagactattagaattagaaattccagaaattcaa
gatggaaccattattcttaaaaaagtagtgagaataccaggtgaaaaagctaaaattgct
gtagatgcttacgatgatagaatagaccctgtgggagcgtgtgtgggggttaaaggttct
agaatacacggtgtggtaagagaacttagaaatgaaaatatagatgttatccaatggtct
aaaaatccagaaatattggttaagagagctttgggtaatgttactataaataaaatagac
atcaatgcagaggagtcaaaagcattggtatacacgccttcggaggagattgctaaaatc
ataggtaagcaaggtcaaaatatcaaattagcttcttggctatctgattatgaaatagat
gtttacagggaagctcatgaagatgatgatgtagagctagatgaatttagtgatgaaatt
gaggattgggtgatagagactttcaaaaaagttggtttagatacggctaagagtatcata
gataaggatacggaggccttagttcgtttgactgacttggaagaagaaacaatagaagaa
gttaaaagaattttagcagaagagtttaacgattag
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