Riemerella anatipestifer RA-GD: RIA_1069
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Entry
RIA_1069 CDS
T02007
Name
(GenBank) Outer membrane efflux protein
Organism
rar
Riemerella anatipestifer RA-GD
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HlyD_3
Biotin_lipoyl_2
HlyD_D23
Biotin_lipoyl
Troponin
PYNP_C
Motif
Other DBs
NCBI-ProteinID:
ADZ12186
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Position
1047469..1050159
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AA seq
896 aa
AA seq
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MNYKSHNKIYRIHQKTNIKKWFFIGLGILLLLLLLPWTQNIHTNGYVSGLYQEQRPQSIQ
SPIPGKIIHWYVKNGDQVKKGDTLLRISEIKEDYMDPLLVQRAEDQINAKDNVRDYYSAK
IKTIGGQLDAMNAARELKLNQIRIKLQQLNFKINATNAELQAANNEFRMAEDQYRRQEEM
YKQGLVSLTDFQRRNVSYQNALAKKNSIENKLAEAQQEILSLQVEQNATIQDYNEKISKL
EGERFQSMGQVSGSDGEIAKLQTQVTNYKVRQGQYYIIATQDGQITQLSKTGIGEIIKEG
ENIGIIVPKSVKYAVEFYVSPVDLPLLQEGQKIRCTFDGFPAIVFSGWPNSSYGTFPGKI
IAVENNISQNGMFKVVVVESGDKKWPPNIKMGAGSKGIILLNDVPIWYEIWRNINGFPPD
YYIANKQKDEKNKNKTLYLVFWVFSYCLSAQGDSLSFSLGEYLSAVSTHHPVIKRYRYGK
EIAKNEILKAKGNFDPILSGALGQKNIDNTIYYDKKGLEIDIPLWYGMNVIGGVSNVSGK
KLDNSTTSGELYNVGVNIPLGKGLIYDKRRAVLHQAEALYKMTEAEQTTLINEILVDAEN
MYWEWVKQYQIITAYKERLNISEERLEMIKKSYDYGEMASIGVTEAETLYQEFLLGYQQA
SLDYKNTMEQLELFLWKDNQSVTLPPSVYPLEVFSSEKVADYPMLKNYIEENLSSQHRAL
KYYLHKDEFLNVEKKLKWQSFLPKIDFSYNLFSKPSKPIEVFPLFNNFQYGLKLEVPIFM
REARADYEIIKLKKLQNEEDLKMKKQELFTKLEVYKNDFEGYTKQLELYKEYYDNYNKLV
KGEEIKFKNGESSLFILNSRESKLLDIQKKIYNTENKIIKSYNGVKLFQMNMNTQP
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaactacaaatctcacaataaaatctaccgaatacaccaaaaaaccaacatcaaaaaa
tggttttttattggacttggcattctgcttttattactattacttccatggacacagaac
atccataccaatggctatgtaagtgggctttaccaagagcagagaccccaaagcatacaa
tctccaatacctgggaaaatcatacactggtatgtaaaaaacggtgaccaagtaaaaaaa
ggtgacactcttcttagaatttccgaaataaaggaggactatatggatcctctattggtg
caaagagcagaagaccaaatcaatgcgaaagacaatgtaagagattactactctgcaaaa
ataaaaaccattggaggacagctagatgctatgaatgctgctagagaactcaaactgaac
caaatcagaataaaactgcaacagctcaactttaaaatcaatgcaactaatgcagaactt
caagccgccaacaatgagtttagaatggcagaagaccagtacagaagacaagaagaaatg
tacaaacaaggacttgtttctttaacagatttccaaaggagaaatgtatcttaccaaaat
gccctagcaaagaaaaatagtatagaaaacaaacttgccgaggctcagcaagaaatcctt
tctctacaggtagagcaaaatgcgactatacaagactataacgaaaaaataagcaaacta
gaaggcgagcggttccaaagtatgggacaggtatctggaagcgatggagaaatagccaaa
ctacaaacccaagttaccaactacaaagtaagacaggggcagtattacattattgctact
caagacggacaaattacccagctcagcaaaacggggattggtgagattataaaagaaggc
gaaaacataggtattattgttccaaaatcggtaaaatatgccgtagaattttatgtatct
ccagtagatttgccactattacaggaagggcaaaagatacgctgtacctttgatggcttc
cctgccattgtattctctgggtggcccaactcaagctatgggactttccctggtaaaata
atcgctgtagaaaacaacatttctcaaaacggaatgttcaaagtagtagtagtagaaagt
ggtgataaaaagtggccaccaaacatcaaaatgggagcaggctcaaagggtattattctt
ctaaacgatgtccctatctggtacgagatatggcgtaacatcaacggcttccctcctgat
tactacatcgcaaacaaacaaaaagatgaaaaaaataaaaataaaacactatatcttgtt
ttttgggttttctcctattgcttgtctgcacaaggagatagcctttcgttttcattaggc
gaatatctctccgccgtatctacgcatcaccccgttatcaaaagataccgttatggcaaa
gaaatagccaaaaacgaaatcctgaaagccaaaggaaattttgaccccatattgtctgga
gctttaggacaaaaaaacattgataataccatctattatgataaaaaagggcttgaaata
gatatcccactatggtacggaatgaatgtaataggtggcgtgagcaatgtctctggaaaa
aagctagacaacagtacaacctctggtgagctatacaatgtaggcgttaatattccttta
ggcaaagggctgatttacgataaaagaagagccgttttgcaccaagccgaagccttgtat
aaaatgacagaagccgaacaaaccaccctcatcaacgagattttggtagatgccgaaaat
atgtattgggagtgggtaaagcagtatcaaatcattaccgcttataaagaaaggctcaat
ataagcgaggaaaggttagaaatgataaaaaaatcttatgactatggcgaaatggcgtcc
ataggcgtaaccgaagccgaaactctgtatcaagaatttctactgggatatcagcaagca
tcattagattataaaaacactatggagcagcttgagctttttctctggaaagataaccaa
tcggtaacattaccaccatctgtatatccgctagaggtatttagttcagaaaaagtagca
gattaccctatgctgaaaaattatatagaggaaaaccttagttcgcaacatagagcccta
aagtactatctacacaaagatgagtttctaaatgtagagaaaaaattaaagtggcagagc
ttcctcccgaagatagacttcagttataatctctttagtaaacctagcaaacctattgag
gtattccctctatttaataatttccaatacggtctcaaactggaagttcctatttttatg
agagaagctcgggcggactacgaaatcattaaactaaaaaaactccaaaacgaagaggat
ttaaaaatgaaaaaacaagaactctttaccaagttagaagtttataaaaatgattttgaa
ggctacaccaaacagctagaactctacaaagagtattacgataattacaacaaactggta
aaaggagaagagattaaatttaaaaacggagaaagttcattatttatactcaactctaga
gagtctaaacttttggatatccaaaagaaaatttacaacaccgaaaacaaaattataaaa
tcctataacggggttaaactattccaaatgaatatgaatacccagccctaa
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