Riemerella anatipestifer RA-GD: RIA_1145
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Entry
RIA_1145 CDS
T02007
Name
(GenBank) DNA mismatch repair enzyme (predicted ATPase)
KO
K03572
DNA mismatch repair protein MutL
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RIA_1145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rar03400
]
RIA_1145
DNA repair and recombination proteins [BR:
rar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
RIA_1145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
NPF
Motif
Other DBs
NCBI-ProteinID:
ADZ12260
LinkDB
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Position
1130137..1131933
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AA seq
598 aa
AA seq
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MADIIRLLPDYVANQIAAGEVVQRPASVVKELIENAIDAKATKVELIIREAGKNLIQVVD
NGAGMSETDARMAFERHATSKIYATEDIFKIATKGFRGEALASIAAVAQVELKTKKEEDI
VGTNIYIEGGELQFQEAVQTSEGSNFAVKNLFYNVPARRKFLKSNNVEFRHIIDEFHRVA
LAHEDIEFSLYHNDEEIFKLRKASLLQRIVDIFGRKLQPLLIPIKEDLDWVKLNGYVAKP
EGAKKSRGEQFFFVNGRFFRSAYLNKAVQEAFDGLLQQGYNPSFFLYLEIDPEKIDVNIH
PQKTEIKFEDETLIFALIRSTIKKSLGVYNVSPSLDFDKDESQSQLLGLQSHYPKATLSI
SNSSYKAPSIQVDRDYNPFQQERVKPSESIALTELYSQSITTAEPSRINLFEDEDFDEDL
MRLPNGYWLYNRGEDTLMLDLGRMHSVVVSERRKQKKETGVGQKLLFSIEYLLNEMEKNK
YRSIKKYLPQLGFEMELGDDNVLRINAVPNGLKEKQVNEFLEKLFEVLDYKTEEEFMAYY
ENQWTKINAKSRFDFFYKTEVEQMIKDFSDLGFPEYTPSGKKCYIALPLEDLKNKIKN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcagatattattagacttttaccagattatgtagccaaccaaattgcagcgggtgag
gtggtgcaaagaccagcttctgtagtaaaggagctgatagagaatgctatagatgctaag
gcaactaaagtagaactcatcataagagaagctggcaaaaacttgatacaagtagtagat
aatggtgcgggaatgtccgaaactgacgcaagaatggcttttgaacgccacgccacttct
aaaatctatgctaccgaagatatttttaagattgctactaaggggtttagaggcgaagcc
ttagcctctattgcagcggtggcacaggtagagctgaaaactaaaaaagaagaagatatt
gtaggtactaatatctatatagaaggtggagaattgcaatttcaggaggctgtacaaact
tcggaagggtctaattttgcagttaaaaatttattttacaatgtacctgctaggcgtaaa
tttttgaagtctaacaatgtagaatttaggcacattatagacgaatttcatagagtagca
ttggctcatgaggatatagaattttcgctttatcataatgatgaggaaattttcaaactc
agaaaagcaagtcttctacaaagaattgtagatatattcggtaggaaacttcagcctttg
cttattcctataaaagaagatttagattgggtaaaacttaatggttatgttgcaaaacca
gagggagctaagaaatcgagaggagagcaatttttctttgttaatggtaggttttttaga
agtgcttatctcaataaagcggttcaggaagcgtttgatgggttgcttcaacaaggctac
aatccgtcgtttttcttatatctagaaatagacccagagaaaatagatgtaaacatacac
ccacaaaaaaccgaaattaaatttgaggacgaaacccttattttcgctcttattcgttct
acaataaagaaatctttgggtgtttataatgtgtctcctagtttagattttgataaagat
gaaagccaaagtcagcttttaggtttgcaaagtcattatcctaaagctacgctgtccatc
agtaatagtagttacaaagcaccgtctatacaggtagatagagattataatccgtttcag
caggagcgtgtaaaaccttctgaaagcatcgcccttacagagctttatagccaaagtatt
accacagcagagccttctagaatcaatttatttgaagatgaagactttgatgaggattta
atgagattgcctaatggctattggctttataaccgaggagaagatacacttatgctagat
ttgggaagaatgcactctgtggttgttagcgaacgaagaaaacagaaaaaagagacaggc
gtaggtcaaaaactactgttttccatagagtatctgctcaacgaaatggagaaaaataag
taccgttccataaagaaatatttgccacaattaggctttgaaatggaacttggggacgac
aatgttttgagaataaacgccgtgcctaacggattgaaggagaagcaagtcaatgagttt
ttggagaaactatttgaagtgttggactacaaaaccgaggaagaatttatggcttactat
gaaaatcaatggacgaagattaacgctaaatctcgctttgatttcttctataaaaccgaa
gtagagcagatgattaaagacttctcggatttagggtttcctgaatacacaccatcagga
aaaaaatgttacattgccctgccactggaagacttgaagaataaaattaaaaattga
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