Riemerella anatipestifer RA-GD: RIA_1297
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Entry
RIA_1297 CDS
T02007
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease components
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIA_1297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rar02000
]
RIA_1297
Transporters [BR:
rar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RIA_1297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
nSTAND3
ATPase
AAA_29
DEAD
AAA_18
CbiA
GvpD_P-loop
AAA_25
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADZ12399
LinkDB
All DBs
Position
complement(1285071..1286735)
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AA seq
554 aa
AA seq
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MDSLKTLNPYFWKHKKLLSWGIFFIIASNFFAIYQIQFIGKTVDIIQEVISQKKTTQKVL
FRTLLINGGIIIGASVLSGIFRFMMRQTIIVASRKIEYELKNNIFRQYEKLSLTQYKSTT
VGDLLNRLSEDVVAVRMYLGPGVMYVINLVILLIITSVYMFQTNLQMTLWTLLPLPILSF
TIYKVSSIINKKSKIMQKSQSAISTFVQDSFSGIRVIKFFNKEKYIQQNYNTKVKHYQEK
ALDLAKTEAYFFTIILLVIGLLNIIILYIGGQKYIKGEMSIGAIADFFMYINILIWPFSM
VGWVTSVNQRAAASMQRLNEFLDKKSEIINKNKNHYSIKGDIEFRNVSYTYPNTGIKALD
NISFKVNAGESLAIMGKTGSGKSTIALLLCRLIDPDEGDIFIDGINLKEHNLEVYRNALG
YIPQESYLFSDTIENNIGFAIDSSNAKIIEEYAKKADIHKNIIEFKNQYKTIVGERGVML
SGGQKQRICIARALIKKPNILIFDDSLSALDTETEENILNNLENLDEKCTRIIITHRPSS
AKNAHQTLYLSPIN
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggactcattaaaaacacttaatccttatttttggaaacacaagaaacttctttcttgg
ggtatttttttcattatagcaagtaacttttttgccatctaccaaattcagtttataggc
aaaactgtagatattatccaagaagttatctctcaaaaaaaaaccactcaaaaggtgctt
tttcgcacactcctaattaacggaggtattatcattggagcctctgtgctatcgggcatt
tttaggtttatgatgagacaaaccattattgtggcatcaagaaaaatagaatacgagcta
aagaacaatatcttccgtcagtacgaaaaactatctctaactcaatacaaatcaaccact
gtaggagacttacttaatcgtttaagtgaagatgtcgttgccgtaagaatgtatctaggt
cctggggttatgtatgttatcaacctagtgatactactcattatcacaagcgtgtatatg
ttccaaactaatctacaaatgactctttggactcttcttcccttacctatactttcattc
actatttacaaagtaagttctattatcaataaaaagtctaaaatcatgcagaaaagccag
tctgccatttctacattcgtacaagatagcttttctggcattagagtcataaagtttttt
aataaagaaaagtacattcaacagaattacaatactaaggtaaaacactatcaagaaaaa
gctctagacctcgccaaaacagaagcctattttttcacaataatactattagtcattggc
ttactcaatattattattctatacattgggggacaaaaatacataaaaggggaaatgagc
ataggtgccattgcagatttctttatgtacatcaatatacttatatggcccttctctatg
gtaggttgggtaacttcagtaaatcaaagagctgccgcctctatgcaaaggcttaatgaa
ttccttgacaaaaaatctgaaattattaacaaaaataaaaaccattatagcataaaagga
gacatagaatttcgtaatgtaagctatacctaccctaatacaggtattaaggctttagat
aacatcagtttcaaggtaaatgctggcgaatctcttgctattatgggaaaaacaggcagc
ggaaaatctaccatagccctccttctttgtcgattgatagacccagacgaaggagatatt
ttcatagatggtatcaatttaaaagaacacaatctagaggtttacagaaacgctctaggc
tacattccacaagaaagctatctattttctgatactatagagaacaatataggatttgcc
atagatagctctaatgcaaaaatcattgaagaatatgctaaaaaagcagatattcacaaa
aacatcatagaatttaaaaaccaatataaaaccatagttggagaaaggggggtaatgctt
tctggaggacaaaaacaaagaatctgtattgctagagcacttataaagaaacccaatatc
cttatattcgacgacagcctatctgcactagatacagaaacagaagagaatattctaaat
aatttggaaaacctagatgagaaatgtacccgaatcattattacccaccgaccatctagt
gctaaaaatgctcaccaaacactttacctctcccctatcaattag
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