Riemerella anatipestifer RA-GD: RIA_1320
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Entry
RIA_1320 CDS
T02007
Name
(GenBank) Urea amidohydrolase (urease) alpha subunit
KO
K01428
urease subunit alpha [EC:
3.5.1.5
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00220
Arginine biosynthesis
rar00230
Purine metabolism
rar01100
Metabolic pathways
rar01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RIA_1320
09105 Amino acid metabolism
00220 Arginine biosynthesis
RIA_1320
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
RIA_1320
Enzymes [BR:
rar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.5 urease
RIA_1320
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Gene cluster
GFIT
Motif
Pfam:
Amidohydro_1
Urease_alpha
Amidohydro_3
Molybdopterin_N
Motif
Other DBs
NCBI-ProteinID:
ADZ12422
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Position
1312030..1313919
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AA seq
629 aa
AA seq
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MSTEDKNINLEPDHNLESGDNWSRREWIKVVGVATAGLSLMGISPLLAQNSTDVKFENGA
LYVKRETYASLFGATVGDKIRLADTELFIEIEKDFQTYGEENKFGGGKTIRDGMGQSSTV
TDKDCLDMCILGAVIIDHWGIVKADIGIKDGKIVGVGKAGNPDTQDGVSPNMIIGPATEV
HGGWGYIVTAGGIDTHIHYICPEIADTALYSGVTTLIGGGTGPNDGTNATTVTGGKHFIK
RMLQSSEGIPVNTGFFGKGNVTNIKAQAEMIKAGACGTKIHEDWGSTPAAIDAALSVADK
YDVQVAIHSDTLNEAGYLEDTVKAIDGRVIHTFHTEGAGGGHAPDIMKIAMYPNILPSST
NPTKPYTINTAAEHLDMLIVCHHLDPNSKTDLAFADSRIRPSTIAAEDILQDLGVISMMS
SDSQAMGRVGEVVCRTWQTAHKMKIQRGALPEDKKGNDNYRVKRYVSKYTINPALTHGIS
EYVGSVEPGKIADLVLWKPEMFGVKPEIIYKAGMIVASKMGDPNASIPTPQPIIYRKMFG
AFGDALTETSFNFVSKYSVDSGVIDSYGLKKKCLPVKGCRDVKKKDMIHNNATPNIEINP
ETYEVKVDGKVQTCEPLKELPMAQRYLLF
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagaagataagaatatcaatctagaaccagaccacaacttagaatcaggagat
aactggtcaagaagagagtggattaaagtggtgggtgtggctacagcagggctttcactt
atgggtataagtcctttgttagctcaaaatagtacagatgttaagtttgaaaacggagcc
ctttatgtaaaaagagaaacttatgcatctctttttggagctactgtgggagataaaatt
cgtctagcagatacagagctatttatagaaatagaaaaagacttccaaacttatggtgaa
gaaaataaatttggaggaggtaaaactattcgtgacgggatgggtcagtcatcaacggta
acggataaagattgcttagatatgtgtattctaggggctgttattattgaccactgggga
attgtgaaggcagacatcggaataaaagatggaaaaatagtgggtgtaggtaaggcaggt
aacccagatactcaagatggtgtgtctcctaatatgattattggtccagcaacagaggta
catggtggttggggatatattgtaaccgcaggaggaatagatactcatattcattacatt
tgtccagaaattgctgatacagccttatatagtggagttacaactctaatagggggaggt
acaggacctaacgatggtaccaatgcaactacagttacaggaggtaaacattttattaag
agaatgttgcagtcttcagaagggatacctgttaatactggcttttttggtaaggggaat
gtaactaatattaaagcacaagccgaaatgattaaagcgggagcttgtggtaccaaaatt
catgaggattggggttcaacacctgcagcgatagatgcagcattatctgttgcggataaa
tatgatgtgcaggtggctatccactcagatactttaaatgaagcaggttacttagaagat
actgtaaaggctattgatggaagagtaatccatactttccatactgagggtgcaggagga
ggacacgctcctgatattatgaagatagcaatgtatcctaacattttaccatcttctacc
aaccctacaaaaccatatactatcaacacggcggcagagcatttagatatgcttattgtt
tgtcatcacttagaccctaatagtaaaacagatttagcctttgcagattcaagaattcgt
ccttctactattgcagcggaagatattttacaagacttgggtgtaattagtatgatgagt
tcagactctcaagcaatgggtagagttggagaggtagtttgtagaacttggcagactgca
cataagatgaagattcaaagaggtgctcttccagaagataaaaaaggaaacgataattac
agagtgaagagatatgtatctaagtatactataaatccagctttaactcatggtatatca
gagtacgtgggttcagtagaacctggaaaaatagcagacttagttctttggaaaccagaa
atgtttggtgtaaaaccagaaattatctacaaagcaggtatgatagtggcctctaaaatg
ggagatcctaacgcatctatacctacaccacagccaattatttacagaaaaatgtttggt
gcatttggagatgctttaacagagacttcttttaactttgtatctaaatattctgtagat
agtggggtaatagattcttatgggcttaagaaaaaatgcttaccagttaaaggatgtaga
gatgttaaaaagaaagatatgattcataacaacgctacacctaatatagaaattaatcca
gaaacatacgaagtgaaagtagatggtaaagtgcaaacttgtgagcctctaaaagagctt
cctatggcacaaaggtatttattgttctaa
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