Riemerella anatipestifer RA-GD: RIA_1408
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Entry
RIA_1408 CDS
T02007
Name
(GenBank) Holliday junction resolvasome, DNA-binding subunit
KO
K03550
holliday junction DNA helicase RuvA
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RIA_1408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rar03400
]
RIA_1408
DNA repair and recombination proteins [BR:
rar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RIA_1408
RecFOR pathway proteins
RIA_1408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_3
GRHL1_C
HHH_2
KH_SLS1_1
DUF2642
DUF6497
Motif
Other DBs
NCBI-ProteinID:
ADZ12504
LinkDB
All DBs
Position
complement(1397036..1397620)
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AA seq
194 aa
AA seq
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MIYSLRGIVQELSPTHLIIETGGVGYFVSVSVNTSKHFSIGKESLIYTQQIIREDAHLLY
GFSELKEKEMFNLLISVNGVGPASAMIMLSSLELREIAQAILSSNSAVLQKVKGIGTKTA
QRIIIDLKDKVLHFGADESDISTVIDNKVKEESLSALEVLGIPKKMSEKLANKILKQNPE
IQTEDLVKQILKNI
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgatttactctctacgaggtatcgttcaggagcttagcccaacccatttaattatagaa
actggtggtgtaggctactttgtaagcgttagtgtaaacacttctaaacacttttccatt
gggaaagaatctttaatctacacacaacaaatcattcgagaagacgctcacttattgtac
ggtttttcggagctcaaagagaaagaaatgtttaacctacttatttctgtaaatggtgta
ggaccagcctctgctatgattatgctttcctcactagaattaagagaaatagcacaagcc
atactctctagcaatagtgctgtattacaaaaagtaaaaggtataggcaccaaaactgca
caacgaattatcattgatttaaaagataaagtattgcattttggagcagatgaatctgat
atttccaccgttattgataataaagtaaaagaagaatcgttatctgcattagaagtttta
ggaatccctaaaaaaatgtcagaaaagttagccaacaaaattttgaaacaaaatccagaa
attcaaacggaagatttagtaaaacaaattttgaaaaacatttaa
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