Riemerella anatipestifer RA-GD: RIA_1434
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Entry
RIA_1434 CDS
T02007
Name
(GenBank) Predicted ATP-dependent serine protease
KO
K04485
DNA repair protein RadA/Sms
Organism
rar
Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rar03400
]
RIA_1434
DNA repair and recombination proteins [BR:
rar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RIA_1434
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
AAA_22
Lon_C
DnaB_C
AAA
DUF7125
AAA_24
CobU
AAA_14
nSTAND3
AAA_16
nSTAND_NTPase5
Rad51
AAA_5
RsgA_GTPase
NTPase_1
NACHT
Perilipin
SLFN-g3_helicase
ABC_tran
divDNAB
Viral_helicase1
Cas_APE2256
RNA_helicase
RuvB_N
DUF7129
AAA_29
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
ADZ12523
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Position
1423863..1425212
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AA seq
449 aa
AA seq
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MAKLKTVYYCQNCGSQHSKWHGQCQNCGQWNTLVEEIAEKTTSKNYAGDFGRQHLINIIE
VETQAEQRIKTPSEELNRVLGGGIVLGSVTLIGGEPGIGKSTLLLQLALKMKKKILYVSG
EESASQIKMRADRLTELQNPNCFLYTETSIEKILHEAKKLQPDFMIVDSIQTLHSQVMES
SPGTVSQIRECASEVIKFAKATNTPVFLVGHITKDGQIAGPKVLEHMVDVVLNFDGDKNH
LFRLLRANKNRFGSTAEIGIYEMISAGLKEIKNPSEVLITKKSEEFSGNAVAVTLEGNRP
MLLEIQALVSTAVYGTPQRSSTGFDAKRLNMLLAVLEKRSGFQLGAKDVFLNITGGIKTD
DPALDLAVVAAILSSNEDVAVSEHYCFAGEIGLSGEIRPVPQIEKRISEAEKLGYHKIFV
SKQNKIPKKKHDIKIVEVSKIEDFHEEIF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaattaaaaacagtatattattgtcagaattgtggttcacaacattccaaatgg
cacgggcaatgccaaaattgtggacaatggaatactttagtggaagagattgcagaaaaa
acaacctctaaaaattatgcaggagattttggaagacaacacctcatcaatatcatagaa
gtagaaacacaagctgaacaacgcattaaaactccaagcgaagaacttaacagagttttg
ggtggcggtattgttttaggttcggtaactcttattggcggagaaccaggtatagggaaa
tctacactactattgcaattagcccttaaaatgaagaaaaaaatcctctatgtttctggg
gaagaaagtgcctctcaaatcaaaatgagagcagatagactaacggaactccaaaatccg
aattgttttttatacaccgaaacttcaatagagaaaattttacacgaagccaaaaaactt
cagcctgattttatgattgtggattccatacaaactctgcactcgcaggtgatggagagt
tccccaggtacggtatctcagattagagaatgtgcttcggaagttataaagtttgcaaaa
gcgactaacacgcctgtttttttagtgggacacattactaaagatggacaaatagctgga
ccaaaagtattggagcatatggtagatgtagttcttaattttgatggtgataaaaaccat
ttgtttagacttttaagagcaaataaaaatcgttttggttctacggcggagattggtatt
tatgagatgatttcggcaggattgaaagaaattaaaaatccttcggaagtgcttattact
aaaaaatctgaggaattttcagggaatgcggtggcagtaacgctagaaggtaaccgccct
atgttgctagaaatacaagcccttgtaagtacagccgtgtatggtacaccacagagaagt
tctacggggtttgatgctaaaagactcaatatgcttttggcagttttagagaaacgctct
ggttttcagctcggagctaaagatgtatttttaaacattacaggaggtattaaaacagac
gaccccgctctagatttggctgtggtagctgctatcttatcttccaacgaggatgttgca
gtgtcggagcattattgttttgctggggaaattggtcttagtggagaaattcgtcctgtg
ccacaaatagaaaaacgcatctccgaagccgaaaaattaggctatcataaaatttttgtt
tctaaacaaaataagataccaaagaaaaaacacgatataaagattgtggaagtttctaaa
atagaagactttcacgaagagatattttaa
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