Riemerella anatipestifer RA-GD: RIA_1471
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Entry
RIA_1471 CDS
T02007
Symbol
yidC
Name
(GenBank) YidC
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar02024
Quorum sensing
rar03060
Protein export
rar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RIA_1471 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RIA_1471 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIA_1471 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rar03029
]
RIA_1471 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rar02044
]
RIA_1471 (yidC)
Mitochondrial biogenesis [BR:
rar03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
RIA_1471 (yidC)
Secretion system [BR:
rar02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RIA_1471 (yidC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
60KD_IMP
YidC_periplas
DUF6500
DUF350
Motif
Other DBs
NCBI-ProteinID:
ADZ12560
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Position
1468329..1470119
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AA seq
596 aa
AA seq
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MMQQNNGLDKNQLIGFVVFTLFLLGVMLYFQKQQTGQEQQQVATEQKVGATNNIVKATNL
PVKANEIQKVSLKNDKISVEFSGLGGQISSLLMNNYKAYNKKTNQNDLPLYLIERNNSSY
GFKFKDKSGKEINTKDLVFTSQVNGNTVTMTSVLNGGAIVQFIYTLKDYQVDFQVATKGL
SSIVSGDKASFVWNYTPKEQEKGRAQEQQHTEFVYAFNNYKSTDYDARTSMDETKEVLNW
LAVKQQFFTPIIEAKNGFKNSTGHQDMIEEGEYLKKFDFNGELEITGGEFNQSFSWYFLP
LDLKLLKTFDKNFDEIIPLGWSFIGTMNRWIFIPMYNMISSWGIAAGWVIFLMTILVKVV
LSPIMYKQHKLSAMMKVIRPEIEEVNAKLKDADPMKKQQAVMEVYRKAGVNQLAGCLPAL
LQIPIFYALFRFFPNMLDLRGKGFWFATDLTAYDDLIKLPFHIPFLGEHISIFALACTAV
LLIYTVMTAGNMQQPTQEGMPNMKPLMYIFPVMFLFFLNSAASGLSWYYFVSNGINIIII
LVIKYWILDEKTIHAQIQANKAKPKKEGKFQKRMREMMEKAQEQQRLQEQQRAKRK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacagaataatggattagacaaaaatcagttaattggttttgtggtatttact
ctatttttattaggagtaatgttatactttcaaaagcaacagactgggcaagagcaacaa
caagttgccacagagcagaaggtaggagctactaacaatattgtaaaagccaccaatctg
cctgttaaagctaacgaaatacaaaaagtaagccttaaaaatgataaaatatcggtggag
tttagtggacttggaggtcagatttcttctctattgatgaataattataaagcttataat
aagaaaaccaaccaaaatgacttaccattatatcttatagagcgtaataattcttcgtat
ggttttaaatttaaagataaatcaggcaaagagattaacaccaaagatttggtgtttacg
tctcaagttaatgggaatacggtaactatgacgagtgtcttaaacggtggagctattgta
cagtttatttatactttaaaagattatcaggttgattttcaagtagcgactaaagggttg
tcgtctattgtttctggagataaagcaagtttcgtttggaactatacacctaaagagcag
gaaaaaggtagagctcaggagcaacaacatacagagtttgtttacgcttttaataattat
aaaagcaccgactatgatgccagaacttctatggacgaaactaaagaagttttaaattgg
ttagcggttaaacagcagttttttacacctattatagaagccaagaatgggtttaaaaac
tccacaggtcatcaggatatgattgaggaaggggaatatcttaagaaatttgatttcaac
ggagagttggaaattacaggaggagaatttaatcaaagtttttcgtggtactttttgccg
ttggatttaaaattattaaagacttttgataagaactttgatgaaatcattcctcttggt
tggtcttttataggaacaatgaaccgttggatatttatccctatgtataatatgatttca
tcttggggaatagctgcaggttgggtaattttcctaatgacgattttggttaaagtggta
ctttctccaattatgtacaaacaacataagttgagtgcaatgatgaaagtgattcgtcct
gaaatagaggaagtaaatgccaaactcaaagacgccgatccaatgaagaagcaacaagca
gtgatggaggtgtatagaaaggctggtgttaatcagttagcagggtgtttaccagcattg
ttacaaattcctatattctatgcactattccgtttcttccctaatatgttagatttaaga
gggaaaggcttctggtttgcaaccgacttaacagcttatgatgatttaataaaattacca
tttcatattccatttttgggagagcatatcagcatttttgctttggcttgtacggcggta
ttattgatatatacagtgatgacagcaggtaatatgcaacaaccaacgcaggaaggtatg
cctaatatgaagcctttgatgtatattttcccagtaatgttcttgtttttcttgaactct
gcggcatcaggattatcttggtattactttgtatctaacggtatcaatattatcattatc
ctagtgattaagtactggattttagatgaaaaaacaatccatgcacagattcaagctaac
aaagcgaagcctaaaaaggaaggtaagttccaaaaaaggatgcgtgaaatgatggaaaaa
gctcaagaacaacaaagattgcaggagcaacagagagctaaacgcaaataa
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