Riemerella anatipestifer RA-GD: RIA_1560
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Entry
RIA_1560 CDS
T02007
Name
(GenBank) Valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RIA_1560
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rar01007
]
RIA_1560
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rar03016
]
RIA_1560
Enzymes [BR:
rar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RIA_1560
Amino acid related enzymes [BR:
rar01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RIA_1560
Transfer RNA biogenesis [BR:
rar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RIA_1560
Prokaryotic type
RIA_1560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ADZ12649
LinkDB
All DBs
Position
complement(1566001..1568619)
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AA seq
872 aa
AA seq
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MQISEKYTPSSTEQKWYNYWLENKYFHSEPNHKPPYTIVIPPPNVTGILHMGHMLNNTIQ
DVLIRRARMRGYNACWVPGTDHASIATEAKVVAKLKAEGINKSDISREEFLKHAWEWTHK
YGGTILEQLKKLGCSCDWDRTRFTMEDKLSEQVIKSFVDLYNKGLIYRGYRMVNWDPEAK
TNISDEEVIFKEQNGKLYHLKYQIEGTQDFLTVATTRPETIFGDVAVCVNPNDERYQKLI
GKTVIVPIVNRSVPIIADEYVDIEFGTGTLKITPAHDVNDYEIGQKHQLQIIDAIDDDGK
LNHHGMHYEGKDRFVVRKEIAKELEEKGLLAKAEDYVNKVGTSERTGAVIEPKISQQWFL
KMSEIAKPALEVVMNDEIKFYPDKFKNTYKYWMENIRDWNISRQLWWGQQIPAYYYGEGE
NDFVVAENAEKALELAREKAQNPNLGLADLKQDEDALDTWFSSWLWPMSVFDGLLNPNSK
EINYYYPTTDLVTGPDIIFFWVARMIMAGLEWRGKVPFKNVYFTGIVRDKQRRKMSKSLG
NSPDPIELIDKYGADSVRVGILLSSAAGNDLLFDEDLMLQGRNFATKIWNAFRLVQGWKQ
ENKPAGAVENQTIEWFGHLLDKTVKEINEQFEKFRISDALHLIYKLIWDDFCSWYLEAIK
PNYGEGISKEVYDKTIAYFEELMKLLHPFMPFLTEELWQNITSRNTDEALIIAQQKEASE
FDVNIINQFDIAKEWISGVRNYRQSKGISPKETVELYTNALENSNEALIKKLANVSDIYF
NEKTDKPSFSFLVGSTELSIPLSETLDLEEEKKKTEEELSYLKGFLASVEKKLSNEKFVS
GAPEKVVEMERKKQKDAQDKIALLEEKLKTLG
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcagagaaatataccccttcctctaccgaacaaaaatggtacaactactgg
ttagaaaacaaatattttcattctgaacctaatcataaaccaccctacaccattgtaatt
ccaccgcctaatgtaacgggaattttgcacatggggcatatgctgaataacaccattcaa
gatgtgttgattagacgagcaagaatgagaggttacaatgcttgttgggtaccaggaacc
gaccacgcctctattgctacggaagctaaagtggtggctaaacttaaagcagaaggcatt
aacaaatcggatatttctcgtgaagaatttctgaaacacgcttgggaatggacgcataaa
tatggtggaacaattttagaacaactaaaaaaattaggctgttcttgtgattgggataga
acccgctttacgatggaggataaactctccgaacaagtgataaaatcttttgtagattta
tataacaaagggcttatctacagaggttaccgtatggttaactgggacccagaagccaaa
accaacatttccgatgaggaagttatctttaaagagcaaaacggaaaactctatcactta
aaatatcagattgagggaacacaagattttcttaccgtggctaccacgcgtcctgaaact
attttcggtgatgtagccgtatgcgtaaaccctaacgacgaacgctaccaaaaacttatc
ggcaagaccgttatcgtgcctatcgtcaatcgttcagtgccaattattgccgatgaatat
gtagatattgaattcggaacaggaactttaaaaataacgcctgcccatgatgttaatgat
tacgaaattggtcaaaaacatcagcttcaaatcattgatgctattgatgatgatggcaaa
ctaaatcatcacggaatgcactacgaagggaaagaccgtttcgtggttcgtaaagaaatt
gcaaaagagttagaagagaaaggtctcctcgccaaggcggaagactatgtaaacaaggtg
ggaacttccgaaagaacaggagcggtgatagagcctaaaatctctcaacaatggttctta
aaaatgtccgaaattgcaaaacccgctttagaggtggtaatgaacgatgagattaaattc
tatcctgataaatttaaaaacacctataaatattggatggaaaacatccgagattggaac
atctctcgtcagctttggtggggacaacaaatccctgcctactactacggagaaggcgaa
aacgattttgtagtggcggaaaacgctgaaaaagcattggaattagcaagagaaaaagct
caaaatccaaacctaggccttgccgacttaaaacaagacgaagacgctttagacacttgg
ttctcttcttggctgtggccaatgtctgtatttgacggattattaaaccctaacagtaaa
gagatcaactattattatcctaccaccgacctcgttacaggtccagacattattttcttt
tgggtagccagaatgattatggcaggattggaatggagaggtaaagttccttttaaaaat
gtgtatttcacagggattgtaagggataaacaaagacgcaaaatgtctaaatctttaggc
aattcgcctgacccaatagaattgattgacaaatacggcgcagacagcgtaagagtagga
attctattgagttctgcggctggaaacgaccttctgttcgacgaagacttaatgttacaa
gggcgaaattttgccactaaaatatggaatgctttccgtctggtacaaggttggaaacaa
gaaaataaacctgctggtgcggttgaaaaccaaacgatagaatggtttgggcatctatta
gataaaaccgtaaaagagattaacgaacagtttgaaaaattcagaatatcagacgcctta
catcttatttataaattaatttgggacgatttctgttcttggtatttggaagccattaaa
ccaaattacggcgaaggcatttctaaggaggtttacgacaaaaccattgcttattttgaa
gagttgatgaaattgctccacccttttatgcctttcttaaccgaggaactttggcaaaac
attacttcaagaaatacagacgaagccctcatcatcgctcaacagaaagaagcatcagag
tttgatgtaaatattatcaaccaatttgatattgctaaagaatggatttctggtgtgaga
aattacagacaaagcaaaggtatttctcctaaagaaaccgtagagctctacaccaatgct
ctcgaaaacagcaacgaagcacttataaagaagcttgctaatgtctctgatatttatttc
aatgaaaaaacagacaaaccaagtttctctttcttagttggttctacagagctttctata
ccacttagtgaaacacttgatttagaagaagagaagaagaaaacagaggaggaactttct
taccttaaaggctttttagcttcggttgagaaaaagctaagcaatgaaaaattcgttagt
ggagctcctgaaaaagtggtagaaatggagcgaaaaaaacaaaaagatgctcaagataaa
atagctcttctggaagaaaaattaaaaacattgggatag
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