Riemerella anatipestifer RA-GD: RIA_1569
Help
Entry
RIA_1569 CDS
T02007
Name
(GenBank) CMP-2-keto-3-deoxyoctulosonic acid synthetase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00541
Biosynthesis of various nucleotide sugars
rar01100
Metabolic pathways
rar01250
Biosynthesis of nucleotide sugars
Module
rar_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RIA_1569
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rar01005
]
RIA_1569
Enzymes [BR:
rar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
RIA_1569
Lipopolysaccharide biosynthesis proteins [BR:
rar01005
]
Lipid A
RIA_1569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
CofC
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
ADZ12657
LinkDB
All DBs
Position
1575842..1576576
Genome browser
AA seq
244 aa
AA seq
DB search
MKQKIIAVIPARYQASRFPGKLMELLGDKTVISTTYQNVVETGLFDEVFVATDSEVIFNE
IKENGGKAVMTGTHETGSDRIAEAVKDIECDIVVNVQGDEPFLKKEPLKQLISIFDEDKD
KSISLASLKIKLEQWDDIENPNNVKVITDNNGFALYFSRSVVPFPREKTDDLQYFKHIGV
YAFRREALLEFSSLPMKPLEIAEKIECIRYLEYGMKIKMIETDFVGVGIDVPEDLEKAKQ
LLRL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaaataattgctgtaattcctgctcgttatcaagcaagtagatttcctggc
aagctaatggaattgttgggagataaaaccgttatttctacaacttatcaaaatgtggtg
gaaacggggctttttgacgaagtttttgtagcaacagattccgaggttatttttaatgaa
attaaggaaaacggtggaaaggcagtaatgacaggtacacacgaaacgggaagtgataga
atagccgaagccgtaaaagatattgagtgtgatattgttgtaaatgtgcaaggtgatgag
ccgtttcttaaaaaagaacctctaaaacaattgatttcaatttttgatgaagataaggat
aagagtatttctctggcttcgcttaaaataaaactagaacagtgggacgatatagaaaat
cctaataatgtaaaagtaattacggataataatggctttgctctttatttcagtcgttcc
gttgttccttttcctagagagaaaacagatgatttgcaatattttaaacatattggcgtt
tatgcttttagaagggaagcgttgctagagttttctagtttaccgatgaagcctttggaa
atagcagaaaaaatagaatgcatcagatatttggaatatggtatgaaaattaaaatgata
gaaactgatttcgttggtgtgggtatagatgttccagaagatttagaaaaagcgaagcaa
ttgcttagactttaa
DBGET
integrated database retrieval system
