Riemerella anatipestifer RA-GD: RIA_1639
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Entry
RIA_1639 CDS
T02007
Name
(GenBank) 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00061
Fatty acid biosynthesis
rar00540
Lipopolysaccharide biosynthesis
rar01100
Metabolic pathways
rar01212
Fatty acid metabolism
Module
rar_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RIA_1639
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RIA_1639
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rar01005
]
RIA_1639
01004 Lipid biosynthesis proteins [BR:
rar01004
]
RIA_1639
Enzymes [BR:
rar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
RIA_1639
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
RIA_1639
Lipopolysaccharide biosynthesis proteins [BR:
rar01005
]
Lipid A
RIA_1639
Lipid biosynthesis proteins [BR:
rar01004
]
Fatty acid synthase
Component type
RIA_1639
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
Motif
Other DBs
NCBI-ProteinID:
ADZ12722
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All DBs
Position
1646099..1647493
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AA seq
464 aa
AA seq
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MSDKQKTLKEEVSLSGIGLHTGKQVNLTIKPAKENTGFVFVRTDLEGNPQVEADVNYVTT
TERGTTLEKLGVKIHTCEHLLAALVGMDLDNAILELDSAEPPILDGSSKFFVEAIEKAGI
VEQEKAREYLVIKEVMSYTDPNSGADITIIPSDTYEITTMVDFGTKVLGTQNATMKHISE
FKEEFASARTFSFLHELEMLLDHGLIKGGDISNAIVYVDKELTPETTEKLKKAFGREEIS
IRPNGVLDNLTLNYPNEAARHKLLDVIGDLALVGVKIKGKVIANKPGHFVNTQFAKKLNR
QWKLQKKKNVPDFDLTKEPVYDINGIMGLLPHRPPFLLVDKILELSDTHVVGLKNVSMNE
PFFTGHFPKEPVMPGVLQIEAMAQTGGILVLANVPDPENYSTYFVKIDKVKFKKKVVPGD
TLIFKIDLIEPIRRGIVHMQGYGYVGDSVVVEAELMAQVAKTKI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataagcaaaaaactttaaaagaagaagtttctctttcagggataggtcttcat
acaggtaaacaagttaatcttactataaaaccggctaaggaaaatacaggttttgtattt
gtaagaacagatttggaaggaaatcctcaagtggaagcagatgtaaactatgttaccact
accgaaaggggaactacattagaaaaattaggggttaaaatacatacttgtgagcacctt
ttggcggctctagtaggtatggatttagataatgcaatattagaattagatagtgcggaa
ccaccaattttagatggttcttctaagttttttgtagaagcaatagagaaagcaggtatc
gtagagcaagagaaagcgagagagtacctagtgataaaagaggtaatgagttatactgac
ccaaattcgggggctgatattacgattatcccttccgatacttatgaaattacaactatg
gtggattttggtactaaggtattgggtactcaaaatgcgaccatgaagcatatttctgag
tttaaggaagaatttgctagtgctagaacttttagtttcttacatgagttggaaatgctt
ttagaccacggacttatcaagggtggagatattagcaatgccattgtttatgtggataag
gaactcacaccagaaactacagaaaaactcaaaaaggcatttggtagagaagaaatatct
atccgtcctaatggagttttggataatttaactttaaactatcctaatgaagcggctaga
cacaagttactagatgtaattggagatttggcattggtaggagttaaaataaaaggtaaa
gttattgctaacaaaccagggcactttgttaatactcagtttgctaaaaaactgaatcgc
caatggaaattacaaaagaaaaaaaatgtgcctgattttgatttaactaaagagcctgtt
tacgacatcaatgggattatggggttgcttccgcaccgtccaccatttttattagtagat
aaaattttagaattgtctgatactcatgtggtagggcttaaaaatgtatcaatgaatgag
ccattctttacaggacacttcccaaaagaacctgtaatgccaggggttttacagatagag
gcaatggcacagacaggcggtattttggtattggctaatgtgcctgacccagaaaactat
tctacttactttgttaaaatagacaaggttaagtttaagaaaaaggtggttcctggagat
acacttatcttcaaaatagaccttatagaacctattagaagaggtattgtgcatatgcaa
gggtatggttatgtaggagatagtgtagtggtagaggcagagcttatggctcaagtagca
aaaactaaaatctaa
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