Riemerella anatipestifer RA-GD: RIA_1702
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Entry
RIA_1702 CDS
T02007
Name
(GenBank) tonB-dependent vitamin B12 receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
rar
Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rar02000
]
RIA_1702
Transporters [BR:
rar02000
]
Other transporters
Pores ion channels [TC:
1
]
RIA_1702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF6496
Motif
Other DBs
NCBI-ProteinID:
ADZ12779
LinkDB
All DBs
Position
1710730..1712787
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AA seq
685 aa
AA seq
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MNKRSIISAGILFLGLPLLGQSSKDSIRTIEAVVLSGNTFVHKVSDVPLLIQNIGKKQIK
QVGSLRLNDILMEQTGLVITHNHGTGVQIQGMGAEYTLILVNGMPLLGSTAGTLDLSRIT
VNDIKRIEVLKGPSSSLYGSDALAGVINIITEDAETTKGSLNLRTGTNTTIDFGGDFSIV
KNNFSAHFSANRYSSEGYGFNNNEFAQVVNPFQTYTYSSKLKYKLSPKWELALFSRFYNE
VIDTKTLYQKEKLTGGAKTLDYNISPEITWKPTERLTSVVRWYWSDFKNDTNLKFLETKK
IFDETFYREQYKRVENFTEIKWHPKLQTTLGAGAIFQGVEASRYTNKKEMHQLYGLAQAN
YKATDRWQILAGVRYDYNNVFGAQWNPKLATDFKFTEALILRASVGRGFKAPDFRQLYLN
FTNNLVGYSVVGTQEVEAMVEEMWQQGSISQIFMNPHQMSNLKAESSWAFNMGVDFKAFG
CFKFGVNAFRNNIENLINVAAVARKSNGQNIFSYQNLNQIYTQGLETELAWKFLQNFNFS
LGYQYLEAKDREVLDKIKNGTIKSGENDQGETIKIRKHNYFGIIGRSKHSFNSKIFYQDK
SGFFANLRAIYRGKYGFADLDGNGIINNSKELAPGYFLLNFSTGKTFASKYTFQMGIDNV
LGHTNPQYNPEFFGRLWWASINFSF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagatctataatttcggcagggatattatttctaggattacctctattgggg
caaagttctaaagatagtattaggactatagaagctgttgtgctttctggtaataccttt
gtacataaggtgtcagatgtcccattgctaattcagaacataggcaaaaaacaaataaaa
caagtaggcagtcttcggcttaatgatatcttaatggagcaaacagggctagtgattacc
cacaaccatgggactggtgtgcaaatacaaggtatgggtgccgaatatactttgatcttg
gtaaatggaatgcccttgttgggtagtacggcaggaactttggatttatctagaattacg
gttaatgatattaaaaggattgaagttcttaaaggtccaagctcatctttgtatggttca
gatgctttggcgggagttatcaatatcattacagaagatgcagaaacgactaaaggtagc
ctcaatctaagaacaggaactaatacaaccatagattttggaggcgattttagtatagtt
aaaaataatttttcggctcatttttcagccaatcgttatagttccgaagggtacggattt
aataataatgaatttgcacaagtggtaaaccctttccagacttatacctactcttctaag
ttgaaatataaattaagcccaaagtgggaattagctttattctctaggttttataatgaa
gttattgatactaaaacgctttatcaaaaagagaaacttacagggggtgctaaaacatta
gattataatatttctccagagattacttggaaacctacggagcgtttaacctctgtggtg
aggtggtattggtctgattttaaaaatgacacaaaccttaaatttcttgaaactaagaaa
atatttgacgaaactttttatagagagcagtataaaagggtggagaattttactgaaatt
aaatggcaccctaaactacaaaccacattaggggcaggagctatttttcaaggagtagag
gcttctcgttatacaaataagaaagaaatgcaccaactgtatggcttggcacaggctaat
tataaagcgactgatagatggcaaattttggcaggtgtaaggtacgattataataatgtt
tttggggcacaatggaatccgaaattagcaaccgattttaaatttacagaggcgcttatc
ctaagagcttctgtggggagaggttttaaggcaccagattttaggcaactctatcttaat
tttaccaataatttggtgggatattcggtggtaggcactcaagaggtagaggcaatggta
gaggagatgtggcaacagggaagtataagtcagatttttatgaatcctcatcagatgtcc
aatcttaaagcagagagttcgtgggctttcaatatgggagtggattttaaagctttcggt
tgtttcaaatttggggttaatgcatttagaaataatatagaaaacctcatcaatgtagct
gcagtcgctagaaaatctaatggacaaaatattttctcttatcagaacctcaaccaaatc
tatactcaagggctagaaacagagttggcttggaagtttctacagaattttaatttttcc
cttggataccaatatttagaagccaaagatagagaagtattggataagataaaaaatgga
acgataaaaagtggcgagaacgaccaaggggaaaccataaaaattagaaagcacaactat
tttgggattataggtaggagtaagcatagttttaattctaaaattttttatcaagacaag
agcggtttctttgctaacctaagagctatttatagagggaaatatggttttgcagaccta
gatggaaatggcattataaataacagcaaagagctagctccagggtattttttattaaat
ttttctacaggcaaaacctttgcctcaaaatatacatttcaaatggggatagataatgtt
ttggggcatactaaccctcaatacaatcccgaattttttgggagattgtggtgggcaagt
atcaattttagtttttag
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