Riemerella anatipestifer RA-GD: RIA_1830
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Entry
RIA_1830 CDS
T02007
Name
(GenBank) Carbamoylphosphate synthase large subunit (split gene in MJ)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00220
Arginine biosynthesis
rar00240
Pyrimidine metabolism
rar00250
Alanine, aspartate and glutamate metabolism
rar01100
Metabolic pathways
rar01110
Biosynthesis of secondary metabolites
rar01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RIA_1830
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RIA_1830
00220 Arginine biosynthesis
RIA_1830
Enzymes [BR:
rar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RIA_1830
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
ADZ12893
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All DBs
Position
1825791..1828973
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AA seq
1060 aa
AA seq
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MKRTDLKTILVIGSGPIIIGQAAEFDYSGTQACLSLKEEGYRVILINSNPATIMTDVEIA
DKVYIEPISLEFVSQIIRKERPDALLPTLGGQTGLNMAVELEKSGILEECKVEVLGTKLS
AINQAEDRDLFRELMRELGEPVPESDIVNTVEQALNFANTIGYPVIVRPAFTMGGTGGGI
ASDETELKEIVANGLKYSPVTQCLIEKSIAGFKEIEYEVMRDANDNAIVVCNMENIDPVG
VHTGDSIVVAPSQTLSDREYQLLRNASLKIIRALGIEGGCNVQLALDPHSFNYYIIEVNP
RVSRSSALASKATGYPIAKIAAKIAVGLTLDEIMNPVTGKTYACFEPALDYVVTKIPRFP
FDKFETADRRLSTQMKATGEVMAIGRNFEESLQKAIRSLETGIRHLGLKTKQAAQLTPEE
IERRIRVCDDERLFIIGDALRRGYDWEQIVEWSKIDKFFIWKLKKLVDFEKVIAENKFNA
ETLKEAKKLGFSDLNIAHLWGVTQREVFNFRKENAIMPVYKMVDTCAAEFESETPYFYGT
YEEENESVVTEKESIVVLGSGPIRIGQGVEFDYATVHSVWAIKEMGYEAIIINNNPETVS
TDFSISDKLYFEPLTEEDVMNIIELEKPKGVVVQFGGQTAINLADKLSAHGVKILGTSLE
DLDRAENRDKFEKALQELGIPQPLGKTSTSKEEAIAIANEIGYPVLVRPSYVLGGRAMEI
VYTEQELTHYMEHAVDASPEHPVLIDRYVTGKEVEVDAISDGETVVIPGIMEHIERAGVH
SGDSIAVYPPQNLTEKQIHDLEDYTIRLAKGLNVVGLMNIQYVIDQSGEVFVIEVNPRSS
RTVPFLSKITDVPMANLATKAILGKSLASQGYTNGLVPNKDGVFVKVPVFSFSKLTKVDI
SLGPEMKSTGEVMGKDVTLEKALYKGMIAAGRKVPTHGAILFTVADKHKEEAAVFARRFH
EVGFRIWATEGTAKYFEAKGIPAKIGYKIGEEEVNLIDLIQKGKVQYVVNTTTIGKKTER
DGFQIRRMSVENGVPCLTSMDTVEAILKVIESMSFKMQAM
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagaacagacctaaaaacgattttggtaataggttcagggccaattatcatcgga
caagctgccgagtttgattattcggggacacaggcgtgtctttccctaaaggaggaaggc
taccgcgtgatactcatcaactccaatcctgccaccataatgaccgatgtagaaatagcc
gataaagtttatatagagcctatttctttggagtttgtcagccagattattcgcaaagaa
agaccagatgctttgttgcctacattaggcggacaaacagggcttaatatggcggtagaa
ttagaaaaatcagggatattagaagaatgcaaagtagaagttttaggaactaaactttca
gcgattaaccaagccgaagaccgagacttattccgtgaactgatgcgagaactcggagag
ccagtcccagaatcggatattgtgaatacggtagaacaagcccttaactttgctaatacg
attggctatccggtgattgttcgccctgcttttacgatgggtggaacggggggcggtatc
gcttccgatgaaacagagcttaaagaaattgtagcgaatgggcttaaatacagccccgta
acccaatgtttgattgagaaatccattgcaggatttaaagagatagagtatgaagtgatg
cgtgatgccaacgataacgccattgtagtatgtaatatggaaaacatagaccctgtgggc
gtacatacaggcgactctattgtggtagctccttctcagacgctttcggatagagagtat
caactgttgagaaacgcctcgctgaagattattagagctttggggattgagggcggctgt
aatgttcagttggctttagacccacattcgttcaattattatatcatcgaggttaatccg
agagtatctcgttcttcggcattggcgagtaaggcaacgggctatccaattgccaagata
gcggctaaaatagcggtggggcttaccttagacgaaattatgaaccccgttacgggcaaa
acttatgcgtgttttgaaccagcgttagactatgtggttaccaaaatcccaagatttcca
tttgataaatttgaaacggccgaccgccgcctttccactcaaatgaaagccacaggcgaa
gtaatggcgattgggcgaaacttcgaggagtctttacagaaggctattcgctcgttggag
acaggcatcagacacttaggattaaaaaccaaacaagcggcacagcttacgccagaagaa
atagaaagacgcatcagagtttgcgatgacgagcgattgttcatcattggtgatgcattg
agaagaggctacgattgggagcaaattgtggaatggagcaagattgataaattcttcatt
tggaaacttaaaaaattggtggactttgagaaagtcattgccgaaaataaattcaatgcc
gaaacgcttaaagaggctaaaaagttaggcttctcggatttaaacattgcacacctttgg
ggcgttactcagagggaagttttcaatttccgaaaagaaaacgccattatgccagtctat
aaaatggtagatacttgtgcggcagagtttgagagcgaaacgccttacttctatggtact
tacgaggaggaaaatgaaagcgtagtaacggaaaaagagagtattgtggtcttaggttca
ggacctatccgtattgggcaaggggtggagtttgactatgccaccgtgcattccgtttgg
gcgattaaagagatgggctacgaagccattatcatcaacaacaatcccgaaaccgtatcc
accgatttctctatttcggataaactctactttgaacccctcacagaggaagatgtgatg
aacattatagaacttgaaaagcctaaaggagtggtggttcagttcggtgggcaaaccgca
attaacttagcggacaaactatcggctcacggggttaaaattttaggaacttctttggag
gatttagaccgtgcagaaaaccgagataagtttgaaaaagcccttcaagaattgggtatt
cctcagcctttgggtaaaacttctacttctaaagaggaggcgattgccattgcgaatgag
attggttatcctgttttggtgcgtccgagctatgtcttggggggtagggcgatggagatt
gtctataccgagcaagagcttacccattatatggaacacgccgtagatgccagcccagaa
caccctgtactgatagaccgctatgtaacgggcaaagaggtagaggtagatgccatttct
gatggcgaaacggtggtaattccagggattatggagcatattgaaagggcaggggtacac
tctggcgactctattgcggtgtatccgccacaaaatcttacggaaaaacaaatccacgat
ttagaagattataccatacgattagcgaaggggcttaatgtcgtgggattgatgaacatt
cagtatgtgatagaccaaagcggagaggtgtttgtgattgaggtcaatcctcgctcctcc
agaacggtgcctttcctttctaaaattaccgatgtgcctatggcgaaccttgccactaag
gcgatattgggcaaatctttagcctcgcaaggttatactaatgggctcgtgccgaataag
gacggcgtttttgtgaaagtaccggtattctcgttctctaaactgactaaagtggatatt
tctttgggaccagagatgaaatccacaggtgaagtgatggggaaagatgttaccttagaa
aaagccctttataagggaatgatagccgcaggtagaaaagtaccaacccacggagcgata
ctctttacggtagcagataagcacaaagaagaagcggctgtttttgcgaggaggttccac
gaggtaggctttagaatctgggcaacggaaggaacggcgaaatactttgaagctaaaggc
ataccagccaaaataggttataagataggcgaggaggaagtgaatttgatagaccttatc
caaaaaggaaaagtgcaatatgtggttaataccactaccataggtaagaaaacggagcga
gatgggttccaaattcgccgtatgtcggtagaaaatggggtgccttgcctcacttctatg
gatacggtggaagctatcctaaaggtgattgagtctatgagtttcaagatgcaggcaatg
taa
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