Riemerella anatipestifer RA-GD: RIA_1891
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Entry
RIA_1891 CDS
T02007
Name
(GenBank) Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
KO
K11381
2-oxoisovalerate dehydrogenase E1 component [EC:
1.2.4.4
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00280
Valine, leucine and isoleucine degradation
rar00640
Propanoate metabolism
rar00785
Lipoic acid metabolism
rar01100
Metabolic pathways
rar01110
Biosynthesis of secondary metabolites
rar01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RIA_1891
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RIA_1891
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RIA_1891
Enzymes [BR:
rar01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.4 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
RIA_1891
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transketolase_C
Transket_pyr
PFOR_II
Transketolase_C_1
DXP_synthase_N
DUF3898
ANT
TPPII_C
Motif
Other DBs
NCBI-ProteinID:
ADZ12950
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All DBs
Position
1896108..1898537
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AA seq
809 aa
AA seq
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MSTTYIESQKVSFEDFKNSILNDYKLGRISREMSYLGRREVLTGKAKFGIFGDGKELPQL
AMARVFRNGDFRSGYYRDQTFALAIQAVSVESFFAQLYADTSVEREPASAGRQMNGHYAT
RSLNEDGSWKNLTEQKNISSDISPTAGQMPRLLGLAQASKIYKEIQFEGSEKFSRNGNEV
AFGTIGDASTAEGHFWETLNAACALQVPMIVSIWDDGYGISVPTHNQRAKADITEMLSGF
QRKEGKAEGCEIITVKAWDYPALLDAYARAEDFARNQSIPVVVHVKEVTQPQGHSTSGSH
ERYKSEERLNWEAEYDGLKQFREWILNYSIEIDGQTEILATAEELDALDKEAKKEVKEGQ
KRAWEDYQNAIKAVKEKGLSAVEKLKAQHTQVESLLQDFGKIISVGKREVFHLMRKALWL
TRGQDSAERKDLEKTYQELLLQEQDHYSSHLYSQSQWKATNVKEVKPIYSDNSEEVDGRV
VVRNNFDKIFEKYPQTLVFGEDTGNIGDVNQGLEGMQEKYGATRVADTGIREATILGQGI
GMAMRGLRPIAEIQYLDYILYCLQGMSDDLATVQYRTKGGQKAPVIIRTRGHRLEGIWHS
GSPMAGILNLSKGILVLVPRNLTKAAGFYNTMLQSDEPAVIVECLNGYRLKEKQPDNLGE
FTVPVGKIEVTKEGADVTLVTYGSTWRVVMEAAKELEQLGISAEVIDVQSLIPFDLEHEI
AKSLQKTNRLVVIDEDVEGGTSAFILQQILEKQKAFRYLDSDPVTITAKNHRPAYASDGD
YFSKPSVDDIVEKVYAVFHETNPSKFPKI
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaacttacatagagtctcaaaaagtgtcttttgaggattttaaaaatagtatt
ttaaacgattataaactagggagaatttcccgagagatgtcctatctaggtaggagagag
gtgcttacaggaaaagcgaaatttggtatctttggtgatggtaaagagttgccacagttg
gcgatggcaagggtgtttagaaatggcgattttaggtcggggtattacagagaccaaact
tttgccttagcgatacaagccgtaagtgtagagagttttttcgcacagctttatgcagat
acaagtgtagaaagagagcccgcatcggcaggaagacaaatgaacggacattacgccacc
agaagccttaacgaagatggcagttggaaaaacttaacagaacaaaaaaacatttcttcc
gatatatcacctacggcggggcagatgcctagacttttaggtttggcacaagcctccaaa
atttataaagaaatccaatttgaaggctcagaaaaattctctcgtaatggcaacgaagta
gcttttgggacgataggagatgcctccactgcggaaggtcatttttgggaaacccttaat
gccgcgtgtgccttgcaagtccctatgattgtaagtatttgggacgatgggtatggtatt
tctgtgcctacgcacaaccaaagagccaaagcagatattactgaaatgctatcaggtttc
caaagaaaagaaggtaaagctgaaggttgcgaaatcattaccgtaaaggcgtgggattat
ccagctttgttagacgcttatgctagagcagaagattttgcaaggaatcaaagcattcca
gtggtagttcacgttaaagaagttacgcagccacaagggcactccacatcgggttctcac
gaaagatacaaatcagaagagcgattgaattgggaagcagagtacgatggtcttaaacag
tttagagaatggatactcaattatagcatagaaatagacggacaaacggaaattcttgct
acggcagaagaattagatgccttagataaagaagcaaagaaagaagttaaagaaggacaa
aaaagagcgtgggaagactaccaaaatgctattaaagctgtaaaagagaaaggtctatcg
gcggtagaaaaacttaaagctcaacatactcaagtagaatctttattgcaagattttggt
aaaatcatatcagtaggaaagagagaggtgttccatctgatgagaaaagcactatggctt
acaagagggcaagattctgcggaaagaaaagatttagaaaagacttatcaagagctttta
ttgcaggagcaagaccattattcatctcatctttactctcaatctcaatggaaggcaact
aatgtaaaagaagtaaagccaatttatagtgataattccgaagaagtggacggaagggta
gtggtaagaaataattttgataaaatatttgaaaaatatccacaaaccttagtttttgga
gaagacacagggaacattggcgatgtaaaccaaggtctagaaggaatgcaggagaagtat
ggcgcaacgagagtggcagatacagggattagagaagccactattttaggtcaagggatt
ggtatggcgatgagagggcttcgtccgattgcagaaattcaatatttagattatattctc
tactgtttgcaagggatgagtgatgatttggcaacagtacaatacagaactaaaggggga
caaaaagcgccagtaattataagaaccagagggcatagattagaaggaatttggcattca
ggctctcctatggcggggatacttaacttgtccaaaggaattttggtattagttcctaga
aacttaactaaagcagcaggattttacaacacaatgttacaaagtgatgaacctgcggta
attgtggagtgtcttaatggttatcgtttaaaagaaaaacaaccagacaacctaggcgag
tttaccgtgcctgtgggtaaaatagaggtaacgaaagaaggggcagatgttacccttgtt
acttatggttctacttggcgtgtagtgatggaggcagctaaagaactagagcagttaggc
atttcagcggaagtgatagatgttcagtcgttaattccgtttgacttagagcacgaaatt
gcgaaaagtcttcagaaaaccaatcgtttggtggtgatagatgaagatgtggaaggagga
acttctgcctttattcttcagcaaattttagagaaacagaaagcctttagatatttggat
agcgacccagtaaccattacggctaaaaaccacagaccagcttatgctagtgatggggat
tactttagtaaaccttctgtggacgatatagtggagaaagtttatgcggtgtttcacgaa
actaatccgagtaaattccctaaaatataa
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