Riemerella anatipestifer RA-GD: RIA_1902
Help
Entry
RIA_1902 CDS
T02007
Name
(GenBank) EMAP domain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RIA_1902
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rar01007
]
RIA_1902
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rar03016
]
RIA_1902
Enzymes [BR:
rar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
RIA_1902
Amino acid related enzymes [BR:
rar01007
]
Aminoacyl-tRNA synthetase
Class II (U)
RIA_1902
Transfer RNA biogenesis [BR:
rar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RIA_1902
Prokaryotic type
RIA_1902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
LuxT_C
Motif
Other DBs
NCBI-ProteinID:
ADZ12958
LinkDB
All DBs
Position
1907197..1909599
Genome browser
AA seq
800 aa
AA seq
DB search
MKISNNWLKNYIKTDLSSEKIGAYLTDIGLEVEGIEIFESIKGSLEGIVVGKVLACEKHP
NADKLKKTTVDVGGGKVLEIVCGAPNVEAGQLVPVAVVGTTLYDKEGNSFEIKKAKIRGE
VSEGMICAEDELGLGNSHDGIMVLDETHEVGKPFADYFEITKDEVYEIGLTPNRTDAMSH
YGVARDLNAFLYASNITETEFEKVSSDIFQPEGEHGFSIEVEDAELCSRYIGAVLDNVKV
KPSPEWLKNKLKAIGLNPINNVVDVTNYILHGLGQPLHAFDADKISRQKIVVGVCNSGTR
FTTLDGVERTLNGTEIMIKDASDKPMCIAGVFGGSDSGVSDSTTKVFLESAYFNPVSVRK
AAKAHGLNTDASFRFERGVDVNAVRIAITKAISLLKEVAEAELVGDLIEVYPEKINPHYV
LFRYSKLDQILGVKIHRETVKKILKSLEIEILNEIPDGLELSVPTYRADVTREIDVIEEV
LRIYGYNKIDSPQKIAFSPVKLSFEDQDALENTWARLLQSNGFNEVMNNSLTTVKDETNA
VKLLNPLSNDLAFMRTSLLEGLLQNAVYNINRKNTDIKFFELGKIYHKFETYKERKQLAM
LISGRHQSENWLVPKSSTDFYHLKSYVKLALEVLGITIQEKPLQDARFSDGLEFVSDGKV
LARLGKVAPEYLKSADMEQEAFYAEIEVEACQELRTKGNFKFREIPKFNKIRRDLALLLD
KNITYSDLYQEVMKKPSPYLKSVNLFDVYEGKNLPEGKKSYALSFELLNEEKTLEEKEIS
EIMGGLITLFEKNFNAELRS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatcaaataattggttaaaaaactacatcaaaaccgacttgagttcagagaag
ataggagcttaccttacggacatagggctagaagtagagggtatagaaatttttgaaagt
ataaaaggaagtttagagggtattgtggtaggtaaagttttagcttgtgaaaaacatcca
aacgcagataaactcaaaaaaacaaccgtagatgtaggaggaggtaaggttttagaaatt
gtatgtggagcacctaatgtagaggctgggcaattagtacctgtggcagtagtaggaaca
acgctttatgataaggaagggaatagttttgaaatcaaaaaggctaaaataagaggagag
gtatccgaaggaatgatatgtgctgaagatgaattagggttagggaatagccatgatgga
attatggttttagacgaaactcacgaagtagggaagccttttgcagattattttgaaata
actaaagatgaagtctatgaaatagggctaacgcctaatagaacagatgcaatgtctcat
tatggtgtggctagggatttgaatgcttttctgtacgcgtctaatatcacagaaacagag
tttgaaaaggtatcgtctgatatttttcagccagaaggtgagcatggattttctatagaa
gtagaggatgcagagctttgttctagatatataggagctgttttagataatgttaaggta
aagccttctccagagtggttaaagaataaacttaaagccatagggttaaatcctatcaat
aatgtggtagatgttaccaattatattttacacggtttggggcaacctctacacgcattt
gatgcggataaaatttctagacaaaaaatagtcgtaggtgtttgtaattctggaactaga
tttactactttagatggtgtggagcgaacgcttaacggtacagaaattatgataaaagat
gcttcggataaaccaatgtgtatcgcaggagtatttggtggatcagattctggcgtttca
gattcaacgacaaaagttttcctagaaagtgcttatttcaatccagtatcagtaagaaaa
gcggcgaaagctcatggtttaaatacagatgcatctttccgttttgaaagaggtgtagat
gttaatgcggttaggattgccattaccaaagcgataagtctccttaaagaagtggcagaa
gcagaacttgtaggagatttaatagaagtttatcctgagaaaataaatcctcactatgtg
ctatttagatattctaagctagaccaaattctaggagttaaaatccatcgtgagacggta
aagaagatattaaaatcgcttgaaatagaaattcttaacgaaattccagacggtctagag
ctttctgtgccaacctatagggcagatgttactagagagatagatgtgatagaggaagtg
cttagaatctatggatataacaaaatagatagtcctcaaaagattgcgttttcaccagta
aaattgagttttgaagaccaagatgctttagaaaatacttgggctagattgttacagtct
aacgggtttaatgaagtgatgaacaactcacttactacggtgaaagatgaaaccaatgca
gttaaattgcttaatccattgagtaatgatttggcatttatgagaacttctttattagaa
ggtttattacagaatgcagtctataatatcaatcgtaaaaatacggatattaagtttttt
gagttaggtaaaatctatcataaatttgaaacttataaagaaagaaagcaactagcaatg
ctgatttctggtagacatcaatctgaaaattggcttgtaccgaaatctagtacagatttc
tatcatttaaagtcgtatgttaaattggcgttagaagttttaggaattactattcaggag
aaacctttgcaagatgctcgtttcagtgatgggttagaatttgtttctgatggtaaggta
ttggcaagattgggtaaggtagcaccagaatatcttaaatcagcagatatggagcaggag
gctttttatgcagagatagaagtagaggcttgtcaagaattgagaactaaaggtaacttt
aagtttagagaaatacctaaatttaataagataagaagagatttagcgttacttttagat
aaaaacatcacttattcagatttatatcaagaggtgatgaagaagccgtcgccgtatctt
aaatcggttaatctgtttgatgtttacgaaggtaagaatttgccagagggtaagaaatct
tacgctttgagttttgaacttcttaatgaagaaaaaacattagaagaaaaagaaatttca
gaaataatgggagggctaatcacactctttgagaaaaattttaatgcagagctacgctcg
taa
DBGET
integrated database retrieval system
