Riemerella anatipestifer RA-GD: RIA_1905
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Entry
RIA_1905 CDS
T02007
Symbol
groEL
Name
(GenBank) GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RIA_1905 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rar03019
]
RIA_1905 (groEL)
03110 Chaperones and folding catalysts [BR:
rar03110
]
RIA_1905 (groEL)
03029 Mitochondrial biogenesis [BR:
rar03029
]
RIA_1905 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rar04147
]
RIA_1905 (groEL)
Enzymes [BR:
rar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RIA_1905 (groEL)
Messenger RNA biogenesis [BR:
rar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RIA_1905 (groEL)
Chaperones and folding catalysts [BR:
rar03110
]
Heat shock proteins
HSP60 / Chaperonin
RIA_1905 (groEL)
Mitochondrial biogenesis [BR:
rar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RIA_1905 (groEL)
Exosome [BR:
rar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RIA_1905 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RIA_1905 (groEL)
Exosomal proteins of breast cancer cells
RIA_1905 (groEL)
Exosomal proteins of colorectal cancer cells
RIA_1905 (groEL)
Exosomal proteins of bladder cancer cells
RIA_1905 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
ADZ12961
LinkDB
All DBs
Position
1910627..1912255
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVSVAKEIE
LEDKVENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KAVSTVIENLKSQSQAVGDSSEKIKQVASISANNDDAIGSLIAEAFGKVGKEGVITVEEA
KGTDTTVDVVEGMQFDRGYQSPYFVTNPDKMVAELDNPYILLVEKKISSMKELLPVLEPV
AQQGKALLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
VSEERGFTMDNVTIDMLGRAEKVVIDKDNTTVVNGAGDEAQIKARVNQIKAQMESTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RSIASLENLNGANQDENTGIKIVKRAIEEPLRQIVANAGGEGSVVVAKVSEGKGDFGYNA
KTDEYVNMLEAGIIDPTKVTRVALENAASVAGMLLTTECVITELPKEESAMPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaatttgatatagaatcaagagacgcacttaaaagaggtgtagat
gcattagcaaatgcagttaaggtaactttaggacctaaaggtagaaatgtggttatagaa
aaatctttcggtgctccacatgtaactaaagatggggtttctgtggctaaagagatagag
ctagaggacaaagtagaaaatatgggagctcaaatggtaaaagaagtagcatctaaaacc
aacgatttggcaggagatggtaccactacagctaccgtattagcgcaagctatcgtgaga
gaaggtcttaaaaatgtggctgctggagctaatcctatggatttaaaaagagggattgac
aaggcagtttctactgtaatagaaaacttaaaatctcaatctcaagcagtaggagattct
tctgaaaaaatcaagcaagtagcttctatttctgcaaataacgatgatgcaataggtagc
cttatcgctgaagcttttggtaaagtaggtaaagaaggtgtaattactgtggaagaggct
aaaggtacagatactacggtagatgtggtagaaggtatgcagtttgacagaggttatcag
tcgccttatttcgttacaaatccagacaaaatggtagcggagttagacaatccgtatatt
cttttagtagagaagaaaatttcttctatgaaagaattattgcctgttttagagccagta
gcccagcaaggtaaagctttacttatcatttcagaagaggtagaaggtgaggcgttggca
acattagtggttaacaaactaagaggttctttaaaaatcgctgcagtaaaagctccagga
tttggagatagaagaaaggcaatgttagaagatattgctatcttaacgggtggacaagta
gtttctgaagaaagaggctttactatggataatgtaactattgatatgttaggtagagca
gaaaaagtagttatagataaagacaatactacggtagtaaatggtgctggagatgaggct
caaattaaagctagagtaaatcaaatcaaagctcaaatggaaagcactacttctgactac
gatagagaaaaattacaagaaagattggctaaattagctggtggtgtagcagttctttat
gtaggtgcagcttctgaagtagaaatgaaggagaagaaggatagagtagatgacgcatta
catgctactagagcggcagtggaagaaggtatcgtagctggtggaggtgtagctttggta
agaagcattgcttctcttgagaaccttaacggtgctaaccaagatgaaaacacaggtatt
aaaatagttaaaagagctatagaagaaccattgagacaaatcgtagctaatgcaggtggc
gaaggttctgtagtggtggctaaagtttcagaaggtaaaggagacttcggatacaatgct
aaaacagatgagtatgttaatatgctagaagcagggattatagaccctaccaaagtgact
agagtagcattagaaaatgcagcttctgtggctggtatgctattaactacggagtgtgta
attacagaactacctaaagaagaatctgcaatgccaccaatgggaggcggaatgccaggt
atgatgtaa
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