KEGG   Riemerella anatipestifer RA-GD: RIA_2064
Entry
RIA_2064          CDS       T02007                                 
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
rar  Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:rar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rar03032]
    RIA_2064
   03036 Chromosome and associated proteins [BR:rar03036]
    RIA_2064
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rar02048]
    RIA_2064
Enzymes [BR:rar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RIA_2064
DNA replication proteins [BR:rar03032]
 Prokaryotic type
  DNA Topoisomerases
   RIA_2064
Chromosome and associated proteins [BR:rar03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RIA_2064
Prokaryotic defense system [BR:rar02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    RIA_2064
SSDB
Motif
Pfam: DNA_topoisoIV
Other DBs
NCBI-ProteinID: ADZ13105
LinkDB
Position
complement(2058612..2061185)
AA seq 857 aa
MEEQYQKGETLKKVSRLYKDWFLDYASYVILDRAIPSIFDGFKPVQRRIMHSMKELEDGR
YNKVANIVGNTMKYHPHGDASITDAMVQIGQKELLIDTQGNWGNVYTGDSAAAARYIEAR
LTPFALEVVFNPKTTHWVKSYDGRNNEPIDLPVKFPLLLAQGVEGIGVGLSTKVMPHNFN
ELIEASIAYLKGKKFQLYPDFMTGGMLDVSNYNDGERGGRLRARARIIQKDKHTLCITEL
PFSKTTSDLIDSIIKANEKGKIKIKKIEDNTSDQVEINIHLNNDVSPDKMIDALYAFTDC
EISISPNACVIVGDKPMFLSVSEILKRNTDHTVSLLKRELEIELGELEDKWHFASLERIF
IENEIYQEIKGKDSKEAVYEAINLALQPFIKNLMREVVTEDIIRLTELPFMRISRYDRDK
ALENIAALEGKMEEVKHHLAHLVEYAINYFLNIKKKFGKDKERRTELRVFDTIDATKVAV
ANEKFYVNRAEGFIGTSLRKDEYVFDCSDIDDIITFRKDGVMQVTKVEPKTFVGKDIIHT
GVWKKNDKRTVYNMIYREGKTGPYYMKRFSVTSITRNTEYPLASEVKGSEVLYFSANPNG
EAEVVTVLLKPNARIRKNKIEIDFSDLAIKGRNSRGNLVTKYAVKKVDLKEEGVSTLAPR
KIWFDETVRRLNADARGTLLGSFKGDDKILTINTKGEAKLMTFDLMNRFDDEYLVLEKWR
PDQPITCIYYDGEKEIYFIKRFLLDNTLNPQGFMPSEHPKSFIEFVGVQDGCTAEIIFGK
DKTGKEKDPEIVDIDEFIVVKGIKAMGNQFIKEKVKSINITIPEREEEEEPEMEEKEQSN
DSDDIPEEGIIGDLFGG
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggaagaacaatatcagaaaggagaaacactgaaaaaagtttcaagattatataaagat
tggtttttagattacgcatcttatgtgatattagaccgtgccattccttctatttttgat
ggtttcaaacctgtacaaaggaggattatgcactctatgaaagagttagaagacggtcgt
tacaacaaggtggcgaacatcgtagggaatacaatgaaatatcaccctcacggtgatgct
tccattacagatgcaatggttcagattggtcaaaaagaactccttatagacacacaaggt
aactggggaaatgtctatactggcgactccgctgctgctgctagatatatagaggcgagg
ctaactccttttgcattagaagttgtattcaacccaaaaacgactcactgggtaaaatct
tatgacggcagaaataatgaacctatagatttacctgttaagtttccgttacttctcgct
caaggtgtggaaggtattggtgtagggctttctactaaagtgatgcctcacaactttaat
gaactgatagaagcctctattgcatatcttaaaggaaagaaattccagctttatccagac
tttatgacgggtggtatgctagatgttagcaactataacgatggcgaaagaggtggaaga
ttaagggcgagagctaggattatccaaaaagataagcatactttatgcattactgaactt
ccgttttccaaaacgactagcgacttgattgacagtatcattaaagctaacgagaaaggg
aagattaaaatcaaaaagatagaagataacacttctgaccaggtagaaatcaacattcac
cttaataatgatgtttcgcctgataagatgatagatgcgttgtatgcatttacagattgt
gaaatttccatttcgccaaatgcttgtgttatcgtaggcgataagccaatgttcttgagt
gtttcggaaattttaaaaagaaatacagaccacaccgtttctcttctaaaaagagaactg
gaaatagagcttggagagttggaagacaagtggcattttgcctctctagaaagaatcttt
attgaaaacgaaatttaccaagagattaaagggaaagattctaaagaagcagtttacgaa
gccattaacttagcccttcaacctttcattaaaaacttaatgagagaggtggttaccgag
gatattattcgtcttacggagcttccatttatgcgtatttctagatatgatagagataaa
gcattagaaaatattgccgctcttgaaggtaaaatggaggaagttaagcatcacttagct
catttggtagagtatgccatcaattatttccttaatattaaaaagaaatttggtaaggat
aaagaacgccgaacagaacttagagtttttgatactattgatgccacaaaagtagccgta
gctaacgaaaaattctatgttaatagggcagagggctttataggaacatcacttcgaaaa
gacgagtatgtgtttgattgctccgatatagacgatattattaccttcagaaaagatggg
gtaatgcaagtaactaaggtagaacccaaaacttttgtgggcaaagatattatacacaca
ggcgtttggaagaaaaatgataaacgcactgtttataatatgatttaccgagagggcaaa
acgggaccttattatatgaaaaggttttccgtaacctccatcacaagaaataccgaatat
cctttagcttcagaagttaaaggttcagaagtgctttatttttctgccaaccctaatgga
gaagcagaggtggtaacggttcttttgaagcctaatgctagaatacgaaaaaataaaata
gagatagacttttcagatttggcgattaagggtagaaactctagaggaaatctagttact
aaatacgccgtaaaaaaggtagatttgaaagaagagggcgtttctacgttagcacctaga
aaaatatggtttgatgaaacggtgagaaggcttaatgctgatgcaagaggtacattatta
ggcagtttcaaaggagatgataaaatacttaccatcaataccaaaggagaagctaaacta
atgacttttgatttgatgaatcgctttgatgatgagtatctagtgcttgaaaaatggaga
ccagaccaacctattacttgtatctactatgatggcgagaaggaaatctatttcattaag
agatttttattagataatacacttaatcctcaagggtttatgcctagtgaacacccaaaa
tcctttattgaatttgtgggcgttcaagacggttgtactgcagaaatcatctttggaaaa
gacaaaacaggcaaagaaaaagaccctgaaattgtagatatagacgaatttatagtagtt
aaagggattaaagcaatggggaatcagtttattaaggaaaaagtgaaatccatcaatatt
accattccagaaagagaggaggaagaagaacccgaaatggaagaaaaagagcaatcaaat
gattctgacgatataccagaagaaggtattataggagatttatttggaggttaa

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