KEGG   Riemerella anatipestifer RA-GD: RIA_2066
Entry
RIA_2066          CDS       T02007                                 
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rar  Riemerella anatipestifer RA-GD
Brite
KEGG Orthology (KO) [BR:rar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rar03032]
    RIA_2066
   03036 Chromosome and associated proteins [BR:rar03036]
    RIA_2066
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rar02048]
    RIA_2066
Enzymes [BR:rar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RIA_2066
DNA replication proteins [BR:rar03032]
 Prokaryotic type
  DNA Topoisomerases
   RIA_2066
Chromosome and associated proteins [BR:rar03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RIA_2066
Prokaryotic defense system [BR:rar02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    RIA_2066
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c DNA_gyraseB_C HATPase_c_3 UFD1_N2
Other DBs
NCBI-ProteinID: ADZ13107
LinkDB
Position
complement(2061702..2063603)
AA seq 633 aa
MWVIVFYIKNRGLFMSEALQQVNYSEDNIRTLDWQEHIRLRPGMYIGKLGDGSSADDGIY
ILLKEILDNSIDEFRMKAGKRIEIKLDDRKVQIRDYGRGIPLGKVVDAVSKMNTGGKYDS
KAFKKSVGLNGVGTKAVNALSEYFRVKSVRDNKTKVAEFCRGNITENFPEEDSSDRNGTE
ITFIPDAEIFLNYKFRKEYIERMLRNYAYLNPGLKIIFNGETYFSENGLKDLLEEEMESQ
TLYPIVHLKGDDIEVAITHSDKSQTETYFSFVNGQNTTQGGTHLNAFREAYVKTIREFFN
KNFDASDIRKSIIAAISINVEEPVFESQTKTKLGSNDIGPQGPTVRTFVIDFLKTKLDNF
LHKNPEVAEAIYKKILVSERERKELSGIQKLARERAKKVSLHNKKLRDCRQHYNEQKADR
KSETQIFITEGDSASGSITKSRDVETQAVFSLKGKPLNCYGLTKKVVYENEEFNLLQAAL
NIEESLEDLRYNQVIIATDADVDGMHIRLLMITFFLQFFPDLIKNGHLYILQTPLFRVRN
KKETRYCYTEEERIKALNELGKNPEITRFKGLGEISPDEFKHFIGKDIRLEPVVIGKDQT
IDQILEFYMGKNTPDRQQFILENLVVEEVIEGE
NT seq 1902 nt   +upstreamnt  +downstreamnt
ttgtgggttattgttttttacattaaaaatagaggcttatttatgagtgaagcattacaa
caggttaattattccgaagataacattagaactctcgattggcaagagcatattagactt
cgtccaggtatgtatattgggaagttgggagatggttcatcggctgatgatggtatctat
attttattaaaggaaattctggataactccatagatgagttcagaatgaaagctggtaaa
aggatagaaatcaagttagatgacagaaaagtccaaatccgagattatggaaggggaatc
cctttggggaaagtggtagacgctgtttctaaaatgaatactggagggaaatatgacagt
aaggcatttaagaaatcggtgggacttaacggagtaggtacaaaagcagttaatgcttta
tccgaatatttcagggtaaaatcggtgcgagataataaaactaaagtggctgaattttgc
agaggtaatatcacagagaattttccagaagaagactctagcgatagaaacggaactgaa
attacctttattccagatgctgaaatatttttgaattataaattcagaaaagagtatata
gagcgtatgctcagaaactacgcttatctaaacccaggtcttaaaatcatttttaatgga
gaaacttatttttccgaaaatggactgaaagatttattggaggaagaaatggaaagccaa
acgctttatccaattgtacatcttaaaggtgatgatatagaagtggccattactcactcg
gataagtctcaaacggaaacttacttttcgtttgttaatgggcaaaatactacacaagga
ggaacgcaccttaatgcctttagagaagcttatgtaaaaacaatacgagaatttttcaat
aaaaactttgatgcttcggacattagaaagtccattattgccgcgatttctataaatgta
gaagagcctgtctttgaatctcaaaccaaaaccaagttaggctctaatgatattggtcca
caaggtcctaccgtaagaacttttgtgatagattttcttaagaccaaattagataatttc
ctacataaaaacccagaagttgcagaggcaatttataagaaaatactagtttctgaaaga
gaaagaaaagaactttctggaatacaaaaactcgctagagaaagagctaaaaaggtatct
ctacacaataaaaaactaagagattgtaggcaacactacaatgagcaaaaagccgataga
aaatcagaaactcagatttttataacggagggagattctgcatcagggtctatcactaag
tctagagatgtagaaactcaagccgtgttttctctcaaagggaaaccacttaactgctac
ggacttaccaagaaagtagtgtatgaaaatgaggagttcaacctcttacaagccgcactt
aatatagaggaaagtttagaagatttaagatacaatcaagtcattattgctaccgatgcc
gatgtggacggtatgcacattagattattgatgataactttctttcttcagtttttccct
gatttaattaaaaatggacatttgtatatcttacaaacaccattgtttagggtaaggaat
aagaaagaaactcgctattgctacacagaagaagagcgtataaaagcactaaatgaactt
ggtaaaaaccctgaaatcacaagatttaaaggtcttggagaaatctctccagatgagttt
aaacactttatagggaaagacattagacttgaacctgtggtgatagggaaagaccaaact
atagaccaaattctagaattttacatgggtaaaaacacacctgatagacagcagtttatt
ctagaaaatttagttgtagaagaagttatagaaggagaataa

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