Riemerella anatipestifer RA-GD: RIA_2082
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Entry
RIA_2082 CDS
T02007
Name
(GenBank) DNA polymerase I - 3'-5' exonuclease and polymerase domains
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar03030
DNA replication
rar03410
Base excision repair
rar03420
Nucleotide excision repair
rar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RIA_2082
03410 Base excision repair
RIA_2082
03420 Nucleotide excision repair
RIA_2082
03440 Homologous recombination
RIA_2082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rar03032
]
RIA_2082
03400 DNA repair and recombination proteins [BR:
rar03400
]
RIA_2082
Enzymes [BR:
rar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RIA_2082
DNA replication proteins [BR:
rar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RIA_2082
DNA repair and recombination proteins [BR:
rar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RIA_2082
NER (nucleotide excision repair)
GGR (global genome repair) factors
RIA_2082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
Reoviridae_Vp9
ACS_CODH_B_C
Motif
Other DBs
NCBI-ProteinID:
ADZ13121
LinkDB
All DBs
Position
complement(2077155..2079962)
Genome browser
AA seq
935 aa
AA seq
DB search
MTENTDKKLYLVDAYAMIFRGYYAFIRNPRLTTGGLDTSAIYGFTNSLIELIKKERPTHL
AVVFDVGRQNVRHEDFSDYKANRAETPEAIKIAVPYIHRILKAMHIPILGVEGYEADDVI
GTIAGKAEKQGYEVFMVTPDKDFAQLVTEHIKIYKPGLKGGDVEILGVKEVLEKYEIENP
KQIIDYLGMMGDSVDNIPGLEGVGEKTAKKFIKEYGSMENLLANTHQLKGKLREKVEASA
ERGLMSKKLATILCDAPIEFHQEEYDLETPNFEEVKQIFEEIEFRRLYENLYKAFSTENS
AEEKKSDKDSVQSPVQLDLFSDFEALEQATTTKHTIEDREHLYQYIDTEKGQLLLLQNLL
KQKAVCFDTETTSLDEMEAELIGISFSYKKGLAYYVPIPENRAEAQAIVERFRPFFEKES
ILKIAHNLKYDYKVLLNYGIEVTGNLFDTMIAHYLLNPDGRHGMDYLSEMYLNYKPIALE
TLIGKKGKGQKTLREIDLPTQTQYAAEDADITFQLYEIFSPQLKKEEVEEVFYKIEMPLV
KVLAKMELTGVALDEEWLKDESISLEQDLKILEGQIFEQAGEEFNINSPKQLGDILFEKL
KLDPKAKKTKTGQYSTSEDVLQKLSHKHEIIKLILEYRQLQKLKSTYVDALPNQISPIDG
RVHTSFAQTVAATGRLASNNPNLQNIPIRTERGQQVRGAFVAPKGSKIVSADYSQIELRL
IAEISGEETMIKAFKEGQDIHASTASKLFDVPLNEVSKTQRSQAKTVNFGIIYGQSAFAL
ADQTGLSRTDAKQLIDSYYETYPKLKAFMTEQVQVARKKGYVETIMGRKRHLKDINSNNF
VVRGHAERNAVNAPIQGSAADIIKLAMIKIDSEIKAQGLKTKMLLQVHDELVFEVPNEEI
EVATTLIKQEMETAYSTKVPLLTEVGVGDNWLEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaacaccgataaaaaactgtatcttgtagatgcctacgcaatgatttttaga
ggctactatgcctttatcagaaatcctagacttaccactggtggattagacacttccgct
atctatggttttactaactctcttattgagttaattaaaaaggaacgccctacacattta
gcagtcgtttttgatgtgggaaggcaaaatgtaagacacgaagatttttctgactataaa
gccaacagagccgaaactccagaggctataaaaattgcggtgccttacattcatcgtatt
ttaaaggcaatgcatatcccaattttaggagtagagggctacgaggcagatgatgttata
ggtactattgcaggcaaggcagagaagcaaggttacgaggtatttatggtaacgccagat
aaagattttgcacaactcgttacagagcatataaaaatctataaaccagggttaaaaggt
ggcgatgttgaaatcttaggcgtaaaggaagttttagaaaaatacgaaatagaaaaccct
aagcagattatagattatctaggaatgatgggcgactcggtggataatattcctgggctt
gaaggagtgggagaaaagaccgcaaaaaaattcatcaaggagtatggctctatggaaaac
cttctggccaatactcatcagcttaaagggaaattaagagaaaaggtggaagcctccgca
gagcgtggtcttatgtcaaaaaaactagccactatactttgtgatgctcccatagagttt
catcaagaggagtacgatttagaaacacctaactttgaagaagtaaaacaaatttttgaa
gagatagaattccgaagattgtacgaaaatctttacaaagccttctctacggaaaattcg
gcagaggaaaaaaaatcggataaagattctgttcagtcgccagtacagttagatttattt
tcagattttgaagcattagaacaagctacaactaccaaacataccatagaagaccgagag
catctctatcaatatatagatacagaaaaaggtcagcttttgctcctacaaaatctattg
aaacaaaaagcggtttgttttgatacagaaaccacctctttagatgagatggaagcagag
cttataggcattagtttcagttataaaaaaggcttggcttattacgttccaatccctgaa
aatagagcggaggcacaggctattgtagagcgttttcgtccgttttttgaaaaggaaagc
atcttaaaaattgctcataatctaaaatatgactacaaggtactcctaaattacggtata
gaagttacaggtaatttatttgatacaatgattgcccactacttgctcaatcctgatggc
agacacggcatggattatctttcggaaatgtaccttaactataagcctatagcattagaa
actttaattggcaaaaaaggaaaagggcaaaaaacattacgagaaattgacttaccaaca
caaacacaatacgccgcagaagatgctgatattacctttcaattgtacgaaattttttcg
cctcaattaaaaaaagaagaggtagaagaggtattttataagatagaaatgcctttagtt
aaagtcttagctaaaatggaactaacgggcgtagctttagatgaagaatggctaaaagat
gaaagtattagcttggagcaagatttaaaaattttagaaggacaaatatttgaacaggcg
ggagaagagtttaatattaactctcctaaacagttaggagatatattatttgaaaaatta
aaattagaccctaaagctaagaagacgaaaacaggacagtattccacttcggaagatgtt
ttgcaaaaactttctcataaacacgagattatcaagttaattttggaataccgccaatta
caaaagctaaaatctacttatgtagatgctttgccaaatcaaatcagtccaatagatggc
agagtgcataccagctttgcccaaacggtagccgctacaggaagactggctagtaataat
cctaatttacagaatatccctataagaacggaacgaggacaacaggtaagaggtgctttt
gtagctccaaaaggttctaaaattgtttcagcggattattctcaaatagaacttcgtctt
attgcagaaatttctggagaggaaacaatgataaaggcatttaaggaggggcaggacatt
cacgcttctacggcttccaaattatttgatgttcctttgaatgaagtgtctaaaactcaa
agaagccaagctaaaacagttaattttggtattatttatggacaaagtgctttcgcttta
gcagaccaaacaggtctttctagaactgatgctaaacaactcatagactcctattacgaa
acttatccaaagttaaaagcctttatgacagagcaagttcaagtggctagaaaaaaaggc
tatgtagaaactatcatgggaagaaaaagacaccttaaagatataaactctaacaatttt
gtagtaagaggacatgcagaaagaaatgctgtaaacgccccaatacaaggtagtgctgct
gatattataaaactggcaatgataaaaatagattctgaaataaaagctcaaggtttaaaa
accaaaatgcttttacaggtacacgatgaattggtatttgaagttccaaatgaagagata
gaagttgcgactactttaataaaacaagaaatggaaactgcttattccactaaagtacca
ttgcttacagaggttggggtaggagataattggctagaagctcattaa
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