Riemerella anatipestifer RA-GD: RIA_2133
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Entry
RIA_2133 CDS
T02007
Name
(GenBank) Isopentenyldiphosphate isomerase
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00900
Terpenoid backbone biosynthesis
rar01100
Metabolic pathways
rar01110
Biosynthesis of secondary metabolites
Module
rar_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RIA_2133
Enzymes [BR:
rar01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
RIA_2133
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
DUF7791
Motif
Other DBs
NCBI-ProteinID:
ADZ13167
LinkDB
All DBs
Position
complement(2144447..2144962)
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AA seq
171 aa
AA seq
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MCEKVVLVNPKDEVLGVMEKLQAHRSGFLHRAFSVFLFNAKGEMLLQRRADAKYHSPKLW
TNAVCSHPRLGESYKAGAQRRLIEELGIDADISEKFSFIYKAEVGDNLWEHELDYVFTGI
YEGDFNLNPEEVSEIRYISMEALDKELEANPEQFTEWFKIILKEYKQKMLK
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaaaagtcgttttagtaaatcctaaagatgaggttttaggtgtgatggaaaaa
ctccaagcacatagaagtggttttctgcatcgtgctttttcagttttcttattcaatgcc
aaaggagagatgctcctccaaaggagggcagatgctaagtatcattcacctaaactttgg
actaacgcggtttgttctcatccaagattaggagaaagttacaaggctggagctcaaaga
agactcattgaagagctgggtattgatgctgatatttccgaaaaatttagttttatttat
aaagccgaggttggtgataatctttgggaacacgagctagactatgtatttacaggaatt
tatgaaggtgattttaatcttaatcctgaagaagtttcggagataagatacatctctatg
gaggctttggataaagagttagaggctaatccagagcaatttacagaatggttcaaaatc
attctcaaagagtataaacaaaaaatgttgaagtaa
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