Rhodamnia argentea (silver malletwood): 115725964
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Entry
115725964 CDS
T10595
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03440
Homologous recombination
rarg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115725964
03460 Fanconi anemia pathway
115725964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rarg03032
]
115725964
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115725964
Enzymes [BR:
rarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
115725964
DNA replication proteins [BR:
rarg03032
]
Eukaryotic type
DNA Topoisomerases
115725964
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115725964
FA (Fanconi anemia) pathway
115725964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
DUF1155
Motif
Other DBs
NCBI-GeneID:
115725964
NCBI-ProteinID:
XP_030511509
UniProt:
A0A8B8MQB2
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All DBs
Position
1:complement(36555075..36575761)
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AA seq
918 aa
AA seq
DB search
MSGGGRAINVLSVAEKPSVAKSVATLLSRAQGMRVREGRSRYNKIFEFDYSIRGQHCRML
VTSVTGHLMELDFEERFRKWHSCDPADLYAAPVRKFVPQDKMDIKRTLEEEARRCQWLVL
WLDCDREGENIAFEVIDICTAVNCNLTIKRARFSALIEREIHDSVQNLVEPNQWFADAVD
ARQEIDLRIGASFTRFQTMLLRDAFVIDSAADDRNLVLSYGPCQFPTLGFVVERFWEIQS
HEPEEFWTINCSHRSEEGIVTFNWMRGHLFDYTCAAIIYEMCVEEPSATVTRVRQQEKFK
YPPHPLSTIEMEKRASRYFRMSSEHTMKVSEELYQAGFISYPRTETDNFSARTDLHAIAQ
EQQGHPVWGSYAQRLLDPSSGLWRNPSNGGHDDKAHPPIHPTKFSGGETNWSQDHHRLYE
LVVRHFLACVSQPAIGAETTVDIDIAGEQFVASGRVIIAKNYLDVYRFESWGGSVIPTYV
PGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDQ
NMRFSPTNLGEALVMGYDDMGYKLWKPNLRSMMEFDMRAVSEGSKTKAEVLETCLQQMKA
CFVDARSSKQKLMEAMAVFFERAARTARDEQHMMGEVVRLCGLCHQSNMVLKRNRDGNLM
VGCLGFPQCRNVVWLPGSVSEAVVTANICNSCRPGPVYMIQFKFRRLEIPPNYSVDHLGC
IGGCDDTLQQLTEICGTGSRMSAARAGAPTPSSTSVHRTNSRQQACSNCRQLGHSSTSCP
SVTSGTRNSRSRREDQQDGGLSISCNTCGASCPLKTANTANNKGRKFYSCQSEGCNFFVW
EDSLQNGGGRHGANGGASNSRAHSNSLGGRGRRGRGGRGSNNATDGTFVSATGDPVSGRC
YVCGDPSHFANVCPNRYA
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggcggacgagccatcaacgtcctgagcgtggcggagaagccatcggtggcg
aagtcggtagccaccctgctgtcgagggcccaggggatgcgggtccgggaagggcggtcg
cggtacaacaagatcttcgagttcgactacagcatcagggggcagcactgccgcatgctg
gtcacctccgtcactggccacctcatggagctcgatttcgaggagcggttccgcaagtgg
cactcctgcgatcccgccgatctctacgccgctcccgtccgcaagttcgtccctcaagac
aaaatggatataaagaggacattggaagaggaagccagaaggtgccagtggcttgtgtta
tggcttgattgcgatagggaaggcgaaaacatagcatttgaagttatcgacatatgcacc
gcagtaaactgtaatctgaccataaaaagggctcggttctctgctttgattgaaagggaa
atacatgactctgtgcagaatcttgttgaacccaaccaatggtttgctgatgccgtggat
gcaaggcaagaaatagacctcaggataggtgcatcttttacaaggttccagactatgctg
ctaagagacgcatttgtcattgactctgctgcagatgaccgaaatctagtcctaagttat
ggtccatgtcaattccctacacttggctttgtggtggaacgattttgggagatacaatct
catgaacctgaggagttttggacaattaactgttctcacagatctgaagagggcattgtg
acattcaactggatgcgtggacatctctttgattacacttgcgcagctataatttatgag
atgtgtgtcgaggagccatctgcaactgtcacaagggttaggcagcaggagaaattcaag
tatcctccacatcctttgagtaccattgagatggaaaaacgtgcttctagatatttccgg
atgagctctgagcataccatgaaggtttcggaagagctttatcaagcaggttttataagt
taccctcgtactgaaactgacaatttctctgccaggactgatttgcatgctattgcgcaa
gagcaacaagggcatcctgtatggggatcatatgcacagcgtctactggaccccagttca
ggtctctggagaaaccccagcaatggtggccatgatgataaggcccatccaccaattcat
cctacaaaattttctggtggggagacaaattggagtcaggaccatcatagactgtatgaa
ttggtcgttcgccatttcctggcatgtgtttcgcagccagccattggggcagagaccact
gttgacattgatattgctggtgagcagtttgttgcatcagggcgcgtgattattgctaaa
aattacttggatgtttaccggtttgaatcgtggggaggttcagtgatcccaacttatgta
cctggacagcagttcatcccaacaactttgacattggattcaggagttaccaggcccccg
ccgcttttaagcgaagctgacttactgaattgcatggacaaggctggcattggcactgat
gccacaatgcatgatcacataaagaagctacttgataggttctatgcgaccaaagaccag
aacatgcgcttctcaccaactaacctgggtgaggctctagtcatgggatatgatgacatg
gggtacaagctttggaagcctaacctcaggtcaatgatggaatttgacatgagggcagtt
agtgagggttccaagacgaaagctgaagttctggaaacctgcttgcagcagatgaaagct
tgctttgtagatgccaggtcaagtaaacaaaaactgatggaagccatggctgtgtttttt
gagagagccgctcgaacagctagagatgagcagcatatgatgggagaagttgttcggtta
tgtggactctgtcatcaatcaaatatggtgctcaagcgtaatcgggatggcaatttgatg
gttggctgcctcggctttccacagtgtaggaatgttgtatggcttcctgggtcagtatca
gaagcagttgtgacggccaatatttgcaattcttgccgtccaggtcctgtctatatgatt
cagtttaagtttcgtcggttggaaattcctccaaactacagtgtcgaccatctaggatgc
attggtggatgtgatgacactcttcaacagttaacagaaatatgtggaacgggttctcgt
atgtcagcagcaagagcaggagcgcccactccttcgtcgacttctgtccataggactaac
agtagacagcaggcttgcagcaactgccggcaattggggcattcttccaccagttgtccc
tcagtcacttctggcactcgaaattctcggtctcgcagagaagaccaacaagatggaggg
ttgtcaatttcctgtaatacatgtggagcatcatgtcctttgaaaactgctaataccgca
aataacaaaggacggaaattttactcgtgtcagtcagaaggatgcaatttcttcgtgtgg
gaggatagcctccaaaatggtggaggaagacatggtgcaaatggaggtgccagtaactca
agagctcattccaatagtttgggtggccgtggaaggcgtggaaggggtggacgaggtagt
aacaatgccaccgatgggacttttgtttctgcgactggtgaccccgttagcggcagatgt
tatgtttgtggagatccttcacattttgctaatgtctgcccaaatcgatatgcttaa
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