Rhodamnia argentea (silver malletwood): 115726551
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Entry
115726551 CDS
T10595
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115726551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rarg03021
]
115726551
03041 Spliceosome [BR:
rarg03041
]
115726551
03036 Chromosome and associated proteins [BR:
rarg03036
]
115726551
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
115726551
Spliceosome [BR:
rarg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
115726551
Complex B
115726551
Complex C
U2 SnRNP specific factors
115726551
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
115726551
TFTC complex
115726551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
115726551
NCBI-ProteinID:
XP_030512327
UniProt:
A0A8B8MR26
LinkDB
All DBs
Position
8:complement(20310429..20316574)
Genome browser
AA seq
1213 aa
AA seq
DB search
MYLYSLTLQKATGIVCAINGNFSGGKSQEIVVARGKILDLLRPDDSGKIQTVLSVEIFGA
VRSLAQFRLTGAQKDYIVVGSDSGRIVILEFNKEKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTITYSICGVDCGFDNPI
FAAIELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEAVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQ
TEYGDIFKATLEHDGEHVQELRIKYFDTIPVTSSMCVLKSGFLFAASEFGNHALYQFQAI
GEEADVEASSATLMETEEGFQPVFFQPRSLKNLVRIDQVESLMPIMDMKVENLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNLIDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSAAPESLLFLEVQASIGGEDGADHPASLFL
NAGLSNGVLFRTVVDMVTGQLSDSRSRFLGLKAPKLFSIVIRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYEALEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYTP
RKFVFHKKKSLIIIESDQGAFTAEEREAGKKEFFEAAGMGENGNNNGEQMENGGDDEDKN
DPLSDEQYGYPKAESDKWVSCIRVLDPKTSNTTCLLELQDNEAAYSVCTVNFREKEYGTL
LAVGTAKGLQFWPRRSLASGFIHIYRFVDDGRALELLHKTQVEGVPLALCQFQGRLLAGI
GPVLRLYDLGKKRLLRKCENKLFPNTIVSVQTYRDRIYVGDIQESFHYCKYRRDENQLYV
FADDSVPRWVTAAHHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN
GAPNKVEEIVQFHVGDVVTCLQKASLIPGGGDSVIYGTVMGSLGALLPFTSRDDVDFFSH
LEMHLRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDMQRKIADELDRTPAE
ILKKLEEVRNKII
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacagtctcaccctgcagaaggccacgggcatagtctgcgccatcaacggc
aacttctccggcggcaagtcccaggagatagtcgtcgctcgtggcaagatcctcgacctc
ctccgccccgacgatagcggtaagatccagaccgtcctctcggttgagattttcggcgcc
gtcaggtccttagctcagttcaggctcactggagcccagaaggattacatcgtcgtcggg
tccgattccgggcgtatcgtgattttggaattcaataaggagaagaatgtgttcgacaag
atccaccaagagactttcggtaagtcggggtgtcgacgaatcgtgccgggccagtacctg
gccatcgaccctaagggaagggctgtcatgattggggcttgtgagaagcagaagcttgtt
tacgttttgaatagagatacagcggctaggttgacgatatcatcgcctctagaggcgcat
aagtcacacaccataacgtactcgatttgtggggtagattgtgggtttgataacccaata
tttgctgcaattgagctggattactcggaggctgaccaagattcaaccggtcaggcagcg
agtgaggcacaaaagcacttgacattttatgagcttgatttggggcttaaccatgtatcc
agaaaatggtcggaggccgtcgataacggtgctaacatgctcgttactgtgcctggagga
ggcgacgggcctagtggagtgttggtatgtgcagagaatttcgtaatttataagaaccag
ggtcacccggatgtccgtgcagttattccgagacgagctgatttgccagcagaacgtggt
gtgctgattgtctcggctgctacgcacaagcagaagtctatgtttttcttccttttgcag
acggagtatggggatatatttaaggccacattggagcatgatggcgaacatgttcaggag
ttgaggatcaagtattttgatacaattcctgttacttcttccatgtgcgttttgaaatca
ggttttctgtttgcagcatctgagtttggaaaccatgctctgtatcagttccaggcgata
ggtgaagaagctgatgtggaggcttcatcggctacgctaatggaaactgaagaaggtttc
cagcctgtgtttttccagcctagaagccttaaaaatcttgtaaggattgaccaggtcgag
agcttaatgcccataatggacatgaaagtagaaaatctatttgaggaagaaacacctcag
atattcacattatgtggtcggggtcctcgatcttctttgagaatactaaggccgggtttg
gccattagtgaaatggccgtttcacagcttcctggtgtaccgagtgctgtttggactgtg
aagaagaacttaattgatgagtttgatgcgtacatcgtcgtgtcatttgcaaatgcaact
cttgtgctttcgattggtgagacagtcgaagaagtaagtgacagtgggtttcttgatact
acaccatcccttgcagtgtccctcattggcgatgattctttaatgcaagttcaccccagc
ggtatcagacacatccgggaagatggtcgtattaatgaatggaggactcctggcaagagg
actatagtgaaggtcggttctaacaggctacaagtggtgattgctctcagtggaggcgag
cttatatacttcgaggtggatatgactggtcagttaatggaggtagagaagcatgaaatg
tctggagatgttgcttgcttggacatagcccctgtgccagaaggaaggcaaagatctcgt
tttcttgcggttggttcatatgacaacactattcggatcttatcgttggatccagatgat
tgcatgcagattttgagtgtacagagtgtttctgcagctccagaatctctcctctttctt
gaagtccaggcatcaattggtggggaggatggtgctgatcatcctgccagtcttttcctc
aatgctggtttaagtaatggagttctgtttaggacagttgttgacatggtaactggtcag
ctttccgactctcgctccagatttttaggactgaaagccccaaagctcttttctattgtc
attagaggcaggcgcgctatgctttgtttgtctagtcgtccatggctaggttatattcat
cagggacattttcttttgacacctctttcttatgaggctcttgaatatgctgcttcattt
tcatctgaccaatgtgctgaaggtgtggttgctgtagctggggatgcattgagggttttc
actattgagaggttgggagaaacatttaatgagactgcaattcctttgagatacactcct
agaaagtttgtatttcataaaaagaagtccctgataatcattgaaagtgatcagggggca
ttcaccgcagaagagcgtgaagccgggaaaaaggaattctttgaggctgctggtatgggg
gaaaatgggaataataatggtgaacagatggagaatggtggtgatgatgaggacaagaat
gatcctctgtctgatgaacagtatggctatccaaaggcagagtctgacaagtgggtttct
tgcatcagagtgctcgacccaaagacatcaaacacaacctgtctgctggaacttcaggac
aatgaagctgcatatagtgtatgcactgtgaacttccgtgagaaagagtatggaacattg
ttggctgttggtacggcgaaaggattgcagttctggccaagaagaagtttggcttctggg
ttcattcatatttacaggtttgtggatgatgggagagcccttgaacttttgcacaagacg
caagttgaaggtgttcctctagctttatgtcagttccagggaaggttacttgccggcata
ggcccagtcctaaggctctatgatttgggaaagaaaagattgctcagaaaatgcgagaat
aagctgtttcccaacacaattgtgtctgttcaaacctaccgcgatcgaatttatgtgggt
gatatacaagagtctttccattattgcaagtaccgacgagatgagaaccagttatatgta
tttgctgatgattctgtaccaagatgggttacggcagcacaccacattgattttgacact
atggcaggagcagacaaatttggcaatgtttattttgtccgtttaccacaggatgtctca
gatgagattgaagaagatccaactggtgggaagataaaatgggaacaggggaagttgaat
ggagcgccaaataaagtggaggagatagtgcaatttcatgttggtgatgtagttacttgc
ctgcagaaggcatccctgattcctgggggtggagattctgtcatctacggaacagtaatg
gggagcttaggagcgttacttccatttacatcccgtgatgatgttgatttcttctcgcac
ttggagatgcatttgaggcaggaatacccccccttgtgtggcagagatcacatggcttac
cgatctgcctattttcctgtcaaggatgtgattgacggcgatttatgcgagcagtttcca
accctgcctatggatatgcaaagaaaaatagccgatgaattggatagaaccccagcggag
atcctaaagaagttggaagaagtgagaaacaaaatcatatag
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integrated database retrieval system
