Rhodamnia argentea (silver malletwood): 115726624
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Entry
115726624 CDS
T10595
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rarg03009
]
115726624
Ribosome biogenesis [BR:
rarg03009
]
Eukaryotic type
90S particles
Other 90S particles
115726624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Nop14
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_like
Beta-prop_WDR19_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
115726624
NCBI-ProteinID:
XP_030512439
UniProt:
A0A8B8MRV4
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Position
9:14218728..14226373
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AA seq
531 aa
AA seq
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MPTLTGKRSKKRGGAKVHKRGNKKYSINEDPFFSHQKRRRVEDDGMDDDDGDDDDDDDIV
VSSASEEEGVAEEAEESEFDRETADEKRQRVAKEYLDKIRAIARREKEDDDEGEEDEEED
EDEFGGRVRDGVRDSLVSKILQQEQLEESGRVRRQIASRVKKPETVDNFCALVKHRHSVT
AVALSEDDLRGFSASKDGTILHWDVSSGKSEKYAWPREDTLRSHGTKDPQGRAKKHSKHV
LALAVSSDGRYLASGGQDRHVHLWDTRTREHIQAFPGHRGPVSCLTYRQGTSELFSGSFD
RTIKMWNMDDRAYINTLFGHQSEVLTIDCLRKERVLTVGRDRTMQLFKIPEETRIVFRAP
ASSLECCCFISNDQYLTGSDDGSVELWSMLRKKPVYIIKNAHPFFLKDNKFDNGDSEKIP
NGDAENFKSNPENTQNSTAHSWVSSISVCRGSDLAASGAGNGYIRLWAVKSETNNIQPLY
DLPLVGFVNSLAFAKSGEFLVAGVGQEPRLGRWGRVQAASNGVAVQSLKLL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgccgactctgacggggaaaaggtcgaagaagagaggtggtgccaaggtacacaagaga
ggcaacaagaagtactccataaacgaggaccccttcttcagccaccaaaagcggcgccgg
gtcgaggacgacggcatggatgacgacgatggcgacgacgacgacgacgacgatatagta
gtcagcagcgcctccgaggaggaaggcgtcgcggaagaggcggaggagtccgagttcgac
agggagaccgcggacgagaagcggcagcgagtggcgaaggagtacctggataagattcgg
gcgatcgcgaggagggagaaggaagatgacgacgagggcgaggaggatgaggaggaggat
gaggacgagtttgggggaagagtgcgggacggagtccgggattcgctcgtctcgaagatt
ctgcagcaggagcagctcgaagagagcggtagagtccgccggcaaattgcttccagggtt
aaaaagccagagacagttgataatttttgcgccttagtaaagcaccggcattcggtcacg
gccgtagcattgtctgaggatgacttgaggggcttttcggcatcaaaggatggtaccata
ttgcattgggatgtaagtagtggaaaaagtgaaaagtatgcttggcctagagaggataca
ctgaggtctcatggaaccaaggatccgcaaggtcgagctaaaaagcatagtaaacatgtt
ttagctttggctgttagctcagatgggaggtatttggccagcggaggccaagatcgccat
gttcatttgtgggacacgcggacacgcgagcacattcaggcttttccaggtcatagagga
ccggtgtcttgtttaacttataggcaaggaacttcggaacttttctctggttcttttgat
cgaacaatcaagatgtggaacatggatgacagagcttacattaacaccttgtttggccac
caaagtgaagttctaactatagattgcttaagaaaggaacgtgttttgactgtcgggcgt
gatcggacaatgcaattgtttaagattccggaggagacaagaatagttttccgagctcca
gcatcatctttggaatgctgttgttttattagcaatgatcaatatctgaccggctcggat
gatggaagtgttgagctctggagtatgctacgaaagaaacctgtttacatcattaagaat
gctcaccctttcttcctcaaggacaataagtttgataacggagatagcgaaaagatcccc
aatggtgacgcagagaacttcaaatccaaccctgaaaatactcagaactcaacagcacat
tcatgggtgagttcaatcagtgtgtgcagaggtagtgatcttgccgcctcaggtgctgga
aatggttacattcgtctgtgggctgtcaaaagcgagaccaataatattcagcccttatat
gaccttccactggttggatttgtcaattcattggcatttgcaaaatctggggagttcctt
gtggcgggtgttggacaggaaccccgtctaggacggtgggggcgtgtacaagctgccagt
aatggcgttgccgtccagtctctcaagcttttgtaa
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