Rhodamnia argentea (silver malletwood): 115726781
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Entry
115726781 CDS
T10595
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rarg03041
]
115726781
Spliceosome [BR:
rarg03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
115726781
Other components
Complex C specific factors
115726781
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
115726781
NCBI-ProteinID:
XP_048135362
UniProt:
A0ABM3HFH6
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Position
5:complement(30431507..30438875)
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AA seq
859 aa
AA seq
DB search
MDEDQEMERFGMDNDYEDGQWIDGEFYYRRRREKRAQTKEDVLYGVFASGDSDSDYDDSS
KRKRKKNRDLLGKADLSKPVNFVSTGTVMPNREIDENSKRENEDDESAAMDEDRPGLGVG
AGVGLGFKNRDYGFDENGEEEDRFLPTAFGRKIKEGAERRREQSKLEKKAQQGAVKRDSS
ESGNVGGFEKYTKGIGLKLLEKMGYKGGGLGKNQQGIVTPIEAKLRPKNMGMGFNDYKET
SAKAPVASLEPEEKKPLPDVPGKEKLWSKQAKKATLKSKVTYVTAEELLAKKQEQGVEVV
QKVLDMRGPQVRVLANLENLNAEEKARESDVPMPELQHNIRLIVDLAELDIQKIDRDLRN
EKETALSLQEEKEKFRAEAELQKKQLNNMKEIMTTLGRIEEEKSMGSLTLDSLAKYFGDM
QRRFPDDYKLCNISCIACSFALPLFIRVFQGWDPLRNPSHGLEVVSRWKSLLQGQECLDI
WDLGSPYTQLVSEVVLPAVRISGINTWEARDPEPMLRFIETWEKLLPSSVLQSILNMVVM
PKLSSAVDSWDPRRETVPIHVWVHPWLPLLGQKLEGHYQIIRSKLSNVLHAWHPSDGSAY
TILSPWKTVFDSASWEDFMRRFIVPKLQLVLQEFQINPADQKLDQFYWVMSWASAIPIHL
MVDMMEKFFFVKWLQVLYHWLCSNPDFNEVMNWYRGWRDLFPQELLANESIRYQLRIGLD
MMDNAAEGMEVVQPGVRENLSYHRVLEQRQFEAQQKAAAYARQQAAVGAGGTSQVDAGGG
MPEMKLKEVIEAYAQQHELLFKPKPGRMHNGLQIYGFGNVSIVVDSINQKVFAQNEEAWS
LVSLEDLLKLHYNSLAKRR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaccaggagatggagaggttcgggatggacaatgactatgaggacgggcag
tggatcgatggggagttctattaccggcggcggagagagaagcgcgcgcagaccaaggaa
gacgtgctctacggtgtcttcgcgtcgggggactctgattccgactacgacgactcctcc
aaaaggaagcgaaagaagaacagagacctcctgggtaaggctgatctatctaaacctgtg
aatttcgtttccaccggcacagtcatgccgaacagagagattgatgagaattcgaagaga
gagaatgaggatgacgagtccgctgccatggatgaggataggccgggcttgggggttggt
gctggtgtaggtttggggtttaagaaccgagattatggtttcgatgagaacggcgaggag
gaggataggttcttgccgacggcatttgggcggaagatcaaggagggagcggagaggagg
agagagcaatccaaattggagaagaaagcacagcaaggtgcggtcaagagggattcttct
gaatcggggaatgtgggcggcttcgagaagtacaccaagggaattggactaaagttgctc
gagaaaatgggttacaaagggggcggtcttgggaagaaccagcaggggattgtgacaccc
attgaagcaaagttgcgtcctaagaacatgggcatgggtttcaacgactacaaagaaact
tctgcaaaggcacctgttgcgtcactggagcccgaggaaaagaagccattacctgatgtg
cccggtaaggagaagctttggtctaagcaagcgaagaaggcgactttgaaaagcaaagtg
acatatgttacagcagaagagctgttggcgaagaagcaggagcagggcgttgaagttgtg
caaaaggtacttgacatgcgtggacctcaggttagggtattagcgaacttggagaatcta
aatgcggaagagaaggcgagggagagtgatgttccaatgccggagctccagcacaatata
aggttgattgtggacctggctgagctggatattcagaagatcgacagggatctgaggaat
gagaaggaaacagctctgagcttgcaagaggaaaaagagaagtttcgagctgaggcagaa
ctccagaagaaacaactcaataatatgaaggaaataatgactacgctaggccggattgag
gaggaaaagtcaatgggatcattgacattagactcgctagccaagtatttcggtgacatg
caaagaaggtttcctgatgattacaaactttgtaacatatcctgcattgcttgctcattt
gcactccctctgtttatcagagtttttcagggatgggatcctcttaggaatccctcacat
gggttggaagttgtttcacggtggaaatctctattgcaaggacaggaatgtcttgatata
tgggatttgggatccccttatacccagttggtttcagaagttgtcttgcctgctgtgaga
atatctggcatcaacacttgggaggcaagggatccagaaccaatgcttcgctttatcgag
acttgggagaaattgttgccttcttctgttctgcagtccatactgaacatggttgtcatg
ccaaaattgtcgagtgctgtggactcatgggatccccgtcgggaaactgttcctatccat
gtttgggtgcatccgtggttacccttgttgggacaaaagttggagggccactatcagatc
atacggtcaaaactgagtaatgtacttcatgcctggcacccgagtgatggctctgcatac
accattttgtcaccttggaagaccgtgtttgattctgccagttgggaagattttatgcgc
cgatttatcgttccaaagttgcagcttgtcctccaggagttccagataaatccggctgat
cagaagctggatcagttctattgggtcatgtcttgggcttctgctatcccgatccatctc
atggtggacatgatggagaagttcttttttgttaagtggctacaggtgctatatcactgg
ttgtgttctaacccagacttcaatgaagttatgaactggtatcgcggttggcgggatctt
ttcccacaagagctgctagcaaatgagagtatcagatatcagcttagaattggtttagac
atgatggacaatgcagctgaaggcatggaggttgtccaacctggtgttagagaaaactta
agttatcacagggtccttgagcagaggcagtttgaggctcagcaaaaagcagcggcctat
gctcgacaacaagctgctgttggtgctggtggcacctctcaggtggatgctggtggtggc
atgcctgagatgaagctgaaagaagtcatcgaggcctatgcacagcagcatgagttgcta
ttcaaacctaagcccggtcggatgcacaatggccttcagatatatggttttggtaatgtg
agcatcgttgtggactctattaatcagaaggtatttgcccaaaacgaggaagcatggtct
ttggtatctcttgaggatctgctgaagctgcactacaattcactggcaaagagacgttag
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