Rhodamnia argentea (silver malletwood): 115726949
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Entry
115726949 CDS
T10595
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115726949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rarg04131
]
115726949
03051 Proteasome [BR:
rarg03051
]
115726949
Membrane trafficking [BR:
rarg04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115726949
Proteasome [BR:
rarg03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115726949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
XPC-binding
UBA_7
UBA_NBR1_C
Ubiquitin_2
DUF3333
Rad60-SLD_2
UBA_HOIP
Dsc3_N
RPW8
Motif
Other DBs
NCBI-GeneID:
115726949
NCBI-ProteinID:
XP_030512909
UniProt:
A0A8B8MS56
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All DBs
Position
5:complement(11436826..11443352)
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AA seq
531 aa
AA seq
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MGSDGDPSDARSSGGEGGVAINVRCSNGAKIAVRASLESTIGAFKSALARDCEVPADQQR
LIYKGRILKDDQTLASYGLQADHTVHMVRGSPLSAGTPPSAAPGAGSIDSASGITSDVAS
DEGAGAGIAATLFGAGFPEIEQVHQQLTQNPNMMREIMNMPSMQNLMDNPDLMRSLIVGN
PQTREIIDRNPELAHILNDPGILRQTLEVARNPELMREMMRNTDRAMSNIEASPEGFNML
RRMYENVQEPLLNATTMGGNNGNDSSSNPFTALLRSQGSSQARDGTNPPSSVSSEATAGL
APNTSPLPNPWGNTGGGTQTNNTTRSNAATNTQPLSNAGLGNLNFPQMDEMFPSSADAAS
LNQLMQNPALSQMMQSVFSNPQYINQIISLNPQLRSMVDSNPPVREMLQNPELLRQLTSP
ETMQQMLALQQSVQSISRPLSNQGQSQTGETAAGTPTNAGIEQLINLFGGLGAGTLTPSM
PDVPPEELYATQLSQLQEMGFFDTQENIRALRATSGNVHAAVDRLLMNLGQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagacggagatcccagcgacgcccgatcgtccggcggggagggcggggtcgcg
atcaacgtccggtgctccaacggcgccaaaatcgctgtcagggcgagcttggagtccacg
atcggggccttcaagtcggccctggcgcgggattgcgaagtcccggctgatcagcagcgg
ctgatttacaaaggccggattttgaaggacgaccagaccttggccagctacggtctgcag
gctgatcatactgtccatatggttcgaggttctcccctatcggcaggcacgcctccttct
gccgctcctggtgctggaagcattgactctgcatcaggtattacaagcgatgttgcttca
gatgaaggtgcgggtgctggtattgcggcgactttgtttggagctggttttcctgagatt
gaacaagttcatcagcagcttactcaaaatcccaatatgatgagagagatcatgaacatg
ccttccatgcaaaaccttatggataatcctgatttaatgcgcagcttgatagtgggcaac
cctcaaacgcgtgagatcattgaccggaatccagagctagcacatattcttaatgatcca
ggcattcttcgtcagactttagaagttgcaaggaaccctgaacttatgcgtgaaatgatg
cgaaacacagacagagctatgagcaacattgaagcctctcctgagggatttaacatgctg
agacgcatgtatgaaaatgttcaggagcccttactgaatgccacaaccatgggagggaac
aatggaaatgactcaagttcaaacccatttaccgctcttttgagaagccaaggcagttca
caagctagagatgggactaatcctccttcaagcgtatcttctgaagcaactgcaggactt
gctcctaatacaagcccattgcctaatccttggggcaatactggtggagggacccagacg
aacaataccactaggtcaaatgctgcgaccaatactcaaccacttagcaatgctggatta
ggaaatcttaattttccacagatggatgagatgtttcccagttcagcagatgctgcttca
ttgaatcagttaatgcaaaatcctgccctatcgcagatgatgcagtctgtattttcgaat
ccccagtatatcaatcagattatcagtctcaacccccagctgcgcagcatggttgattcg
aaccctcctgtaagagaaatgttgcaaaatccagaactccttcgccagcttacttcccct
gaaacaatgcagcaaatgctagctctccaacaatcagttcaatcaatcagtcggccactg
tcaaaccaggggcagagtcagaccggtgaaactgcagcaggtactccaacaaatgctgga
attgagcagctgataaacttgtttggtggccttggagctggtactttaaccccaagcatg
cctgatgtaccgccagaagaactttatgcaactcagctgtcgcagcttcaagaaatgggc
ttctttgacacccaggagaacattagggccctgcgtgcaacgtctggaaatgtccatgct
gctgttgaccgtcttttgatgaatctaggtcaataa
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