KEGG   Rhodamnia argentea (silver malletwood): 115727016
Entry
115727016         CDS       T10595                                 
Name
(RefSeq) DNA repair protein RAD5B isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
rarg  Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rarg03400]
    115727016
DNA repair and recombination proteins [BR:rarg03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    115727016
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX DEAD UBA_RAD5A Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-C3HC4_4 zf-ANAPC11 zf-RING_4 DUF5749 U-box
Other DBs
NCBI-GeneID: 115727016
NCBI-ProteinID: XP_030512986
UniProt: A0A8B8MSC6
LinkDB
Position
1:22101006..22108032
AA seq 1253 aa
MIHDMDDAGEMSIERAEKIERIRTCFGHEMSTRDVSSALSQSLDDVDAAIDLILRTWKVP
FKVKRALAGAGARISAGVKPEPREELEDPKETACEPSKSEVVSAESEVEAASFEKNIVKT
EPDVVGNDRMLSKEKACGGAPEKPQLVRLSEVRGAVDFSMMSFDEPLVATDEEYLRSQSI
KTERMGQVKGETDSVRVEKATGREEKGLVSGEKMVPDAKEVGMGSDEGCIRNQDMQGTAI
GSGVDRSSQRTIVKAEPDFVTVAESRVPRAEEKEILRGDLQVQPWDGKKDVNPKKRKDMD
VDDAIDATPINWAKPKLKLENHMPGLDQLGLKPSSLKSRVVEDRSVSCVVVEDADFALEP
CWHLVGRSVINGVSTTKGRKLIDNEIIHFNFPTVNSRNYSQWIVRFSTKRHGEIGRLEMA
WAKCILPLVKSSKVKVCGRCIAAPANMYIGQEIMLYVSFYMHNSVFTNDRKSSWRLDDPS
NIDSTEYPLLTLFKLLKIKPFREAAYNPEELNTGKCLVNLNLCKGNTNPTVPALPLAMTR
KAGQKCLEENKDEQAISEAALTKIIGSAGVYDLEELEPPDTLMCTLKPYQKEALYWMSRQ
ENQTYVDAGNATKTLNPCWAEYRLYDEAASSIYVNVCSGEATTQFPDAQEMTRGGILADA
MGLGKTVMTIALIHARPSRRHPDANKFFMEGADDIDNTKKRKRDSSIRNTQKVKGGTLII
CPMALLGQWKDELETHSKPESMSIFVHYGGDKTNDPRVFSGYDVVLTTYGVLTAAYKHDQ
DDSIFHRVEWYRVVLDEAHTIKSWMTQGAQAAFALLSHFRWCLTGTPIQNNLQDLYSLIH
FLRVEPWCNWAWWKKRIQSPYESGDGRGIKLVRIILNSLMLRRTKESKDKEGRPILTLPP
TDIQTIECEQSEAEQDFYDALFRRSKVRFDQFVAQGKVLHNYASILELLLRLRQCCNHPF
LVMSRSDSQQYADLNKLARKFLDMNPHTASCNQIVPSRAYVEEVVDGIRRGENTECPICL
ESADDPVLTPCAHRMCRECLLSSWLTHSSGLCPICRQMLRKTDLITCPTESQFRVDVEKN
WKESSKVSKLLDCLEKIRQTGSGEKSIVFSQWTSFMDLLEIPLKRRKFGHLRFDGKLSQK
QRERILKEFNETNDKMILLMSLRAGGVGLNLTAASHVFLMDPWWNPAVEEQAIMRIHRIG
QKRIVSVRRFIVKDTVEERMQQVQARKQRLIAGALTDEEVRSARLEELKMLFR
NT seq 3762 nt   +upstreamnt  +downstreamnt
atgattcacgacatggacgatgccggcgaaatgtcgatcgagcgagccgagaagatcgag
cggatccgtacgtgcttcggccacgagatgtccacgcgcgacgtctcctccgctctgtcc
caatccctggacgacgtcgacgccgccatcgacctcatcctccgtacctggaaggttccg
ttcaaagtcaagcgggctctcgccggcgccggcgctaggatctcggctggagtgaaaccg
gagccgcgcgaagagctggaggacccgaaggaaacggcgtgtgagccgagtaagagtgaa
gttgtctctgcggaatctgaagtagaggcggcatcattcgagaagaatatagtgaaaaca
gagcctgatgttgtcggcaatgacaggatgctatccaaagaaaaagcatgtggtggagca
ccggaaaaaccccagctggttcggctgtcggaagtgcggggagccgttgatttctcgatg
atgtcattcgatgagcccctcgtggccactgatgaggagtacctgaggagccagagcata
aagacggagagaatgggtcaggtaaagggtgaaactgactctgttcgtgtggagaaggca
actgggagagaagaaaagggtttggttagtggagagaaaatggtacctgatgccaaagag
gtagggatggggtctgatgagggatgtatcaggaatcaggatatgcaggggactgctata
ggatcaggagttgatagatcatctcagaggaccatagtcaaggcggagccagattttgtc
accgttgcagaaagtagggtgccaagagcagaggaaaaggagatactacgcggcgatttg
caagtccagccctgggatggtaagaaagatgttaatcccaaaaagaggaaagacatggat
gtagacgacgcaatagatgcaactccaattaattgggctaaaccgaagcttaagctggag
aaccacatgccggggttggaccaactggggctgaaaccctccagtctgaaaagcagagtc
gttgaagataggagtgttagttgtgtggttgtggaagatgctgattttgcattagagcca
tgctggcatttggtgggaaggagcgtgatcaatggggtttcgaccaccaaaggaaggaaa
ttaattgacaatgagatcatccatttcaattttcctaccgtgaactcaaggaattattca
caatggatagttcgtttctctactaaaagacatggggagattggtcggcttgaaatggcg
tgggcaaaatgcattcttccccttgtgaaatcttcaaaggtgaaggtttgtggtcgctgc
atagctgccccagcaaacatgtacatagggcaggaaataatgttgtatgtaagcttttat
atgcacaattctgttttcaccaatgatcgcaagtcgtcgtggaggctagatgatccatcc
aacattgactccactgaatatcctctattgaccctattcaagttgttgaaaatcaaacct
tttcgagaggctgcgtacaacccagaagaactcaatactgggaaatgtttggtaaatctc
aacctgtgtaaaggaaatacaaatccaaccgtgccagcattgcctctggccatgacaaga
aaggctggccagaagtgtctggaagaaaataaggatgagcaagccatctctgaggcagcc
ttaaccaagattatcggttctgcaggtgtatatgacttggaggagttggagcccccagac
acccttatgtgtacccttaagccataccagaaggaagcgctttactggatgtcacggcaa
gagaaccaaacgtatgttgatgcagggaatgccacaaaaactcttaatccttgctgggca
gaataccgtctatacgatgaggcggcctcttctatatatgtaaatgtatgctccggtgaa
gcaaccacacaatttccagatgctcaggaaatgactagaggagggatattagcagatgca
atggggcttgggaagacagtgatgacaattgctttaatacatgcaagaccaagcaggcga
catccagatgctaacaaatttttcatggagggtgctgatgacattgataacacaaagaaa
aggaagagagattcaagtataagaaacacacaaaaagtaaaaggtggcactcttattata
tgtccaatggccctactgggccagtggaaggatgagctcgaaactcattcgaagccggaa
agcatgtcaatttttgttcactatggtggggataagacaaatgatcccagagttttctca
ggatatgatgtagtcctgactacatatggtgtcttgacagctgcttataagcatgatcaa
gatgacagcattttccaccgagttgaatggtatagggtagttttggatgaagctcataca
attaaatcttggatgacccaaggtgctcaggctgcctttgctttgctctcacattttcgg
tggtgtctcactggaacccccattcagaataacttacaagatctctacagtcttatccat
ttcttgcgtgttgagccatggtgcaactgggcatggtggaagaaacgtatacaaagtcct
tatgaaagtggagatggaagagggataaagctggttagaataatattgaactctctgatg
ttgaggcgaactaaagaaagcaaagataaagaaggaaggccgatacttactctccctccg
actgatatacaaactattgaatgtgaacaatcagaagcagaacaggacttctatgatgcg
ctcttcaggagatctaaagtacggtttgatcaatttgtagcacagggcaaggttcttcac
aattatgcatctatccttgaacttctacttcgattgaggcagtgctgcaaccatccattc
cttgtcatgagccgaagtgattcccagcagtatgcagatttgaacaagcttgcaagaaag
ttccttgatatgaatccccatacggcctcctgtaatcagatagttccatctagagcctat
gtagaagaggtagttgacggcatccgacggggcgaaaatacagagtgcccaatttgcctc
gagtcagcagatgatcctgtgctcacaccttgtgctcataggatgtgcagggaatgcctt
ttgtcaagctggcttacacatagctctggcctgtgcccaatctgtcgccaaatgctgagg
aaaaccgatcttattacgtgcccgacagaaagccagttcagagttgatgttgaaaagaac
tggaaggaatcttccaaggtgtcgaagcttttagattgcctggaaaaaattaggcagaca
ggctctggcgagaagagcattgtgttcagccaatggacttcatttatggatctcctggag
ataccactaaagagaagaaaatttgggcacctgagattcgacgggaaactttcgcagaag
caaagggagaggatcttgaaggaattcaacgagacaaatgacaaaatgatacttctgatg
tctcttagagctggtggggtaggtttgaacttaactgctgcttctcatgtctttctcatg
gatccatggtggaatcctgccgtagaagagcaagcaatcatgagaattcaccgcattgga
caaaaacgcattgtttcagttagaagattcattgtcaaggacacggtggaggagcgaatg
cagcaagttcaagcgaggaaacagcgactgatcgccggtgccctcaccgacgaggaggtc
cggtctgctagactggaggagctgaagatgctcttcagatag

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