Rhodamnia argentea (silver malletwood): 115727630
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Entry
115727630 CDS
T10595
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04120
Ubiquitin mediated proteolysis
rarg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115727630
04120 Ubiquitin mediated proteolysis
115727630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115727630
Enzymes [BR:
rarg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115727630
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
U-box type E3
115727630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF5770
Motif
Other DBs
NCBI-GeneID:
115727630
NCBI-ProteinID:
XP_030513742
UniProt:
A0A8B8MUI1
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All DBs
Position
11:complement(16090426..16097517)
Genome browser
AA seq
1030 aa
AA seq
DB search
MSAQKPQRSPQEIEDIILRKILLVTLSGSSETDPRIVYLELTAAEVLSEGKELRLSRDLM
ERVLVDRLSGSFPNAEPPYQYLIGCYSRAYDEGRKIGSMKDKKVKSEMEDVVKQAKKLAV
SYCRIHLGNPELFGGANSDASARKSNVSPLLPYVFGKVASTVEGFGSASEGVKPPPGFLE
EFFGDSDFDSLDPILKQLYEDLRGSVLKVSALGNFQQPLRALMLLVSFPMGAKSLVNHRW
WIPKGVYLNGRVIEMTSILGPFFAVSALPDHPMFKGQPDVGQQCFSEASTRRPADLLSSF
TTIKTVMNNLYTGLKEVLLSLLKNADTRDSVLEYLAEVINKNASRAHIQVDPISCASSGM
FVNLGAVMLQLCEPFMDRDLSKKDKIDPKYVFYSNRLDWRPLTALHASSEEVAEWINKGD
IEKNSKSGEHNEGQNRLLQSQEATSSGSGQSSGTERAKYPFICECFFMTARVLNLGLLKA
FSDFKHLVQDISRCEDTLASLKDAQGHTPSQQLDVEIARLEKEIELYSQEKLCYEAQILR
DKDLIQWALSFYRLMVVWLVDMVGGFKMPLPSDCPKEFACMPEHFVEDTMELLIFASRIP
KALDGVLLDDFMNFIIMFMASPQFIRNPYLRAKMVEVLNCWMPRRSGSSITASLFEGHQL
SLQFLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNIWRQIAKEEE
KGVYLNFLNFLINDSIYLLDESLNKILELKTLEAEMANAAEWERRPAQERQERTRQFRSQ
ENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLK
DPEKYEFRPKDLLKQIVRIYVHLARGDSQNIFPAAISKDGRSYNEQLFAAAADVLRRIGE
DGRVVREFLDLGAKAKVAATEAMDTEEALGEIPDEFLDPIQYTLMKDPVILPSSRITVDR
PVIQRHLLSDTTDPFNRSQLTVDMLIPNVELKARIEEFIRSQESKKRGEGLSFPSSKAMI
QTTNEEMLID
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcagaagcctcagagatcgcctcaggagatcgaggacatcatcctgcgcaag
atactcctcgtcactctgtccggttcgtccgagaccgaccctcggatcgtgtacttggag
ctcacggccgcggaggttctcagcgaggggaaagagctgaggctctcgcgagatttgatg
gagcgagtcctcgtcgatcgtctctcaggtagcttccctaacgcggaacctccttaccag
tacctaattgggtgctatagtcgcgcatacgatgaagggaggaagatcggttcgatgaag
gataagaaggtgaagtcggaaatggaggatgtggtgaaacaagctaagaagttggcggtg
tcgtattgtaggatccatttagggaatcccgagttgttcggtggtgcgaattcggatgcc
agtgcaagaaaatcaaatgtttcgccgttgttgccttatgttttcggcaaggtggccagt
acggtggagggctttggcagcgccagtgaaggcgttaagccacctcctgggtttctggag
gagttttttggagactcggatttcgatagcttggaccctatattgaagcagttgtatgag
gatttgaggggtagtgtgcttaaggtatctgctcttgggaattttcagcagccgttgagg
gcattgatgcttttagtgagtttcccgatgggcgcaaagtcgctggttaatcaccgttgg
tggattccaaaaggagtttacctgaacgggcgtgtcattgagatgactagcattttgggt
ccattttttgccgttagtgcgttgcctgatcatccgatgttcaagggccagcctgatgtg
ggccagcagtgcttttcagaagcgtcaactagacggccggctgatttgttatcttccttc
accacaatcaagactgtcatgaacaacttatacactggtctgaaggaagttcttctttct
ctccttaaaaatgccgatactcgggatagtgtcctggaatatcttgcagaggttatcaac
aaaaatgcctcaagggctcatatacaggttgatccaatatcctgtgcaagttcaggcatg
tttgtaaatctcggcgctgttatgcttcaactttgtgaaccatttatggatagggatttg
tcgaagaaggataaaattgatccgaaatatgtattctatagcaaccgtttggattggaga
cccttgactgccctgcatgcatcctcagaagaagttgctgaatggattaataaaggtgat
attgagaagaatagtaagtcaggtgaacataatgagggtcaaaatcggttgttacaatct
caagaggccaccagctctggcagcggacaatcaagtggtactgaaagggcaaagtatcca
tttatctgcgaatgcttctttatgactgcgagggtgcttaatctaggtctactaaaagca
ttttctgacttcaagcatcttgttcaggacatttcaagatgtgaagatactttagcctca
ctaaaagacgcgcaaggccatacgccttctcaacaattggatgttgagattgctcgcctt
gaaaaggaaatagagctatattcccaagaaaaactttgttatgaagctcagatactgagg
gataaagacctcattcagtgggcgctctctttttaccgattaatggtggtatggttagtt
gatatggttggagggttcaagatgccactgccatcagactgcccaaaggaatttgcatgc
atgcctgagcattttgttgaagatacaatggagttgctaatttttgcttcaaggattcca
aaagctttggatggagtcctgctggatgattttatgaactttataatcatgttcatggca
agtccacaattcattagaaatccatatctcagagcaaagatggttgaagttttaaattgc
tggatgcctcggaggagtggttcatccattacagcatctctcttcgaagggcaccaactt
tccctgcaatttcttgtgaggaatcttctaaagctttatgtggacatagagttcacaggt
tctcatacgcagttttatgacaagtttaatatacgacataatatcgcggagcttctggag
tacctgtggcaggtgcccagtcatcgtaacatctggagacagattgccaaagaagaggaa
aagggtgtctaccttaatttcttgaacttcctgattaatgatagcatctatctgctcgat
gaaagtctcaacaaaattcttgaacttaaaacgctagaagctgagatggcgaatgctgca
gaatgggaacgtagaccagctcaagagaggcaggaaagaacacgccaattccgctcccag
gaaaatataattcgtattgatatgaaattggcaaatgaagatgtgagcatgctggcattt
acttcagaacaaattacagctcctttcttgcttcctgagatggttgaaagagtagccagc
atgctcaattacttcttattgcaacttgtgggtccacagagaaaatctcttagtctgaag
gatcctgaaaagtacgagtttcgtccaaaagatttgcttaaacagattgtcagaatctat
gttcatctggcacgcggtgattcacaaaatatcttccctgctgccatctctaaggatggt
cgatcatacaacgagcagttgtttgctgctgcagctgatgttcttcgtaggatcggtgaa
gatgggagggttgtaagggagtttcttgatcttggtgcaaaagctaaagttgcagcaact
gaggccatggacactgaagaggctcttggagagatacctgacgaatttcttgacccaatt
caatacacgttgatgaaggatccagtgattttaccttcttcgaggatcacagtggaccga
ccggtgattcagaggcatcttctcagcgataccactgacccgttcaaccgctcccaactt
actgtggatatgctgattcccaacgtcgagctgaaggcaagaattgaagagtttatcagg
tcccaagaatcaaagaagcgtggggaggggctgagcttcccttcttccaaggcaatgata
caaaccactaatgaggagatgctcattgattag
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