Rhodamnia argentea (silver malletwood): 115728641
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Entry
115728641 CDS
T10595
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rarg01001
]
115728641
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115728641
Enzymes [BR:
rarg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115728641
Protein kinases [BR:
rarg01001
]
Serine/threonine kinases: Other
Other
115728641
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115728641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_2nd
Beta-prop_THOC3
WDR55
Beta-prop_WDR3_1st
LisH
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
115728641
NCBI-ProteinID:
XP_030514833
UniProt:
A0A8B8MXJ7
LinkDB
All DBs
Position
4:complement(17771636..17781155)
Genome browser
AA seq
1918 aa
AA seq
DB search
MEEQTRQSAAAEEARNEEEEALAKAQSLMDRVTASPDHPSPALLHALSSLLETHESRYLE
QSDHSSNNARAAHPIGRLGNLLRDNDEFFDLVSSKFLSEKTFSTSVQAAAARLLLACSLT
WMYPHVFEDDALENIKRWVIDDTERCPADDSKLKFDSGRKEASDNDMLKAYATGLLAISL
SNGGPLVEDVLTCGLSAKLMHYLRVRVLGDAGQRDTTHLADSKSASVLNCVRGREESRGR
VRLVVEVPHSEDVGSPDERCLEDQASERDRDGGIGWQAFGEDSRIAREPPDSLANEKAKS
GDLDESSRDESSRRRTHRGWSKSRGKGRAGEGAVENEQVLTSPGSVTRLGLGRSVKDKSS
SRHLDVKKIPDTRKLATRGSDGLSSERDDFMELIGECKVGSRDISDLVKNAVRAAEAEAR
EANAPEEAIKAAAAAAAEVVKSAALEALNSKNDEEAAVSAASRAASTVIDAARAVEASRK
SVGTAVESTDQRGMDEIDEDVEYFIPDMETLAQLREKYCIQCLEILGEYVEVLGPVLHEK
GVDVCLALLQRSSKYKEPSKIAGLLPDVMKLICALAAHRKFAALFVDRGGMQKLLSIPRI
AQTFFGLSSCLFTIGSIQGIMERVCALPSDVVRQVVELAIQLLECPQDQAARKNAALFFA
AAFVFRAVLDAFDALDGLQKLLGVLNDAASVRSGVNSVSLGLSSSSSLRTDRSPPEVLTS
SEKQIAYHTAVALRQYFRAHLLLIVDSIRPSKTNRSAPRNSSSMRAAYKPLDISNEAMDA
VFLQLQKDRKLGPAFVRTRWPAVDKFLACNGHLTMLELCQAPPVERYLHDLLQYALGVLH
IVTLVPQSRKMIVNATLSNERVGIAVVLDAANIASTYVDPEIIQPALNVLINLVCPPPSI
SNRPPMLAQGQLSAATQSSNALAMESRDRNADRSITDRIASVTVQNDLRDRNGESSGVDR
GCITSSGIQSSTAPLTPVSASTSGLVGDRRISLGAGAGSAGLAAQLEQGYRQAREAVRAN
NGIKVLLHLLQPRIYSPPVALDCIRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRD
SGSQTLGNEQGRWQAELAQVAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATP
ITYHSRELLLLIHEHLQACGLGGSAAMLLKEAQLTPLPSMVAPAALSYTVCTQESASIQL
QWPSGRTPCGFLSEKSRYSEHNDNSRLRCDSAGSSIRKKPLVFSPSIGSQSKQMSFLDGS
SQLGKKLPSVIKPSAQLILRETPSEATGKTLVDTDPQGKTPIILPMKRKHHEIKDGGFAI
PGKRLQTSEHGLCSPACVTPHTFRRNGTSTDPSGFSTPNATNKDIHGRSTCLLSDVDDSP
YLNCQTGHMTSTDHGLLNDPHSSNNMERLTLDSLVVQYLKHQHRQCPAPISTLPPLSLLH
PHVCPEPKRSLDAPSNVTARLGTREFRSVYGGVLGNRKDRQFVFSRFRPWRTCRDDNSGL
LTCIAFLGNSSHIAAGSHGGELKIFDTNTNTVLDSCTSHQPPLVYVQSRVSGDTQLLLSS
SIQDVRLWDASSIGNGPLHPFEGCKAARFSNSGSHFAALMTDLSNREILLYDIQTYQMEL
KLSDTTFGSTGRAHMYSQIHFSPSDTMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPA
GNEVIINSEVWDLRKFRLLRSVPSLDQTAITFNARGDVIYAILRRNLEDVMSAVHTRRAK
HPLFAAFRTVDAVNYADIATIPVDRCVLDFATEPTDSFVGLITMDDQEEMLSSARVYEIG
RRRPTDDDSDPDDAESEEDEDEEDEEVDIDPILGPGLDGDSDSDPDNMSNDDDSMSDLDE
DDEEDGDFIMDGFEFDGGPGILEIVTEGEDDDDDDGSQMVESFSSGDEEDILRNGFGF
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacagacgcggcagtctgctgcggcggaggaagcgaggaacgaggaagaagag
gcgttggccaaggctcagagcctcatggacagggtcaccgcttctcctgatcatcccagc
cctgcccttctccatgctctctcctctcttctcgagacccacgagtcccgatacttggaa
caaagcgatcactcctccaataatgctcgcgccgctcaccccattgggcgtctcggcaat
ttactccgtgacaatgatgaattcttcgatttggtgtcttccaagttcctgtctgaaaag
acattctcgacctctgtccaagcagctgctgctaggcttcttttggcttgctccctcact
tggatgtatccccatgtttttgaagatgatgctttggagaacataaaacggtgggtgatt
gatgacactgaaagatgtccggctgacgattctaagttgaagtttgattctggaagaaag
gaggcctcggacaatgatatgttgaaggcctatgccacgggacttcttgcaatctctttg
tcgaatggtggtccattggtggaggatgtgttgacttgtggactgtctgccaagctcatg
cattatcttcgtgtacgggtccttggagatgctggacagagagatactactcatctggca
gacagcaaaagtgcttctgtgttgaattgtgttagaggtagagaagaaagtcgggggaga
gtgcggctggttgtagaagtgccacattcagaggatgtcgggtcgccagatgagagatgc
ttggaggatcaagcttctgaacgggaccgggatggaggcattggttggcaagcgtttgga
gaagatagccgaattgctagggaaccacccgatagtctggccaatgagaaggcaaaatct
ggagatcttgacgaaagtagtagggatgaatcttcaaggcgtcgaacacatcgtgggtgg
tcaaaatcaagaggaaaggggagggctggtgaaggagcagtggagaatgaacaagttttg
acctctccaggatcagttactcggttaggtttaggtaggagtgttaaagataagagctcc
tcaagacatctcgatgtgaaaaaaataccggatacccggaaattagcaactcgaggttct
gatggtttgtcctcagagagagatgattttatggagctaattggagaatgcaaagtcggt
agtagagatatctctgatctcgtgaagaatgcagtcagagcagcagaagctgaagcgaga
gaagcaaatgcacctgaagaagccattaaggcagccgccgcggctgctgctgaagttgtc
aaaagtgcagctttggaggcacttaattccaaaaatgatgaagaagctgcagtgtcggca
gcttcaagagctgcatctacagtcattgacgctgctcgtgctgtagaagcctccaggaaa
tctgttggcactgcggttgaatcgacagatcaacgtggtatggatgaaatagatgaagat
gttgaatactttattcctgacatggagaccttggcacagctgcgagaaaagtactgcatc
cagtgcctagagattttgggagaatatgttgaggttcttgggcctgtattgcatgaaaag
ggtgttgatgtctgtcttgctttgctccagaggagctccaaatataaagagccttcaaag
attgcggggctcttgcctgatgtgatgaagctaatatgtgctttggcagctcatcggaaa
tttgcagccctgtttgtggacaggggtggcatgcaaaaactcctttctattcctagaatt
gctcaaaccttctttggtctttcgtcttgcttatttactattggttccattcagggcatt
atggaacgagtgtgtgctcttccttcagatgtggtgcgccaagttgttgagttagctatt
cagcttctagaatgcccccaggatcaggcggcacgaaagaatgcagccttgttttttgct
gctgcttttgttttcagagcagtccttgatgcttttgatgctctggatggtttacaaaaa
ttactgggtgtcttaaatgatgctgcctcagtaagatctggagtgaattctgtatcgcta
ggactctccagttcaagttcacttcggactgacaggtcacctccagaagtgcttacatca
tccgagaagcagatagcttatcacacagctgttgctttacggcaatattttcgggcacat
ttactattgattgtggattcaattcgtccatctaagactaaccgcagtgctccccggaat
agttcgagcatgagggcagcctacaaaccccttgacatcagtaatgaggctatggatgct
gtattcctccaattgcagaaggatcggaagttgggacctgcttttgtgagaacacggtgg
ccagcagttgataagttcttagcctgtaacggacatttgacaatgttggaattgtgtcag
gccccaccggttgagcgctatttgcacgacttgcttcaatatgccttgggtgttctgcac
attgttacgctggtacctcaaagtcgtaaaatgatagtgaatgccacattgagcaatgag
cgtgttgggattgcagttgtattggatgctgcaaatattgctagtacttatgttgaccca
gagatcatacagcctgctttgaatgtgctaattaatcttgtgtgccctccgccttcgatt
agcaatagacctcctatgcttgcacaaggtcagctgtctgctgctacccaaagctccaat
gcccttgccatggaatctagagatagaaatgcagaccgcagtatcaccgatcgaattgct
tctgtgaccgtccagaatgatttaagggatcggaatggtgaatctagtggggttgataga
gggtgcataacgtcatctgggattcaatccagtacagctcctttgacacctgtttctgca
tcaacttcaggattggttggagatcgtagaatatctttaggtgctggagcaggttctgct
ggtcttgctgcgcagctggagcaaggatatcgtcaagcaagagaggctgttcgtgctaat
aatggcataaaggtccttctgcatctccttcagccacgaatatactcacctcctgttgct
ctggactgcatacgtgctctggcttgccgtgtactacttggtttagccagagatgatacc
attgcacacatattaacgaagctccaggttgggaaaaaactgtcagagctcattcgagat
tctggaagccagacgcttgggaatgagcagggtaggtggcaagctgaactagctcaggtc
gccattgaactgatagggattgtgacaaattcaggtcgtgccagtacattagcagctact
gatgctgcaacccctactttgaggcgcatagaacgagcagctatcgctgctgctactcct
attacttatcactccagggaactgttactccttatccacgaacatctgcaagcatgtggt
ttgggtgggagtgctgctatgctgctgaaagaagctcaattgactcctctcccatcgatg
gtggcaccagcagctctttcatatacagtatgcacccaagaatcagcctctatacagctt
cagtggccctctggtcgcaccccatgtggatttctatctgaaaagtcaagatactctgaa
cataatgataattccagattgaggtgtgactcagcgggatcttcaatacggaagaaaccg
ctggttttctcacctagtattggttcacaatcaaaacagatgtcttttcttgatgggagt
tcacaacttggtaaaaagctacctagtgtcataaaaccgtctgcacaattaattttacgt
gaaactccatcagaagctacagggaaaactttagtagatactgatccccaaggtaaaact
cccattattttgccaatgaagagaaaacaccatgagataaaagatggtggctttgcaata
cctgggaagaggttacaaacctctgagcacgggctgtgctcccctgcttgtgtgacgcct
cataccttccgtagaaatggtacatcaactgatccctctgggttttccacaccaaacgca
actaataaggacatacatgggcgatcaacatgtcttttgtctgatgtggatgacagtcca
tatttgaattgtcaaacaggtcatatgacttctactgaccatgggttactgaatgatccc
cattctagcaacaatatggagaggttaactctggattctcttgttgttcaatatctgaag
caccaacatcgacagtgtcctgctccaatttctactcttccacctctctcactcttacat
ccacatgtttgccccgaaccaaaacggagtcttgatgctccatcaaatgttacagcacgt
cttggcacacgggagttcagaagtgtgtatggtggagtccttggaaatcgcaaagatcgt
caatttgttttcagtagatttagaccatggcgaacatgccgagatgacaatagcggtctc
ttgacttgcatagcttttcttgggaactcctctcatattgcagctggtagccatggtgga
gagctcaaaatatttgacaccaacaccaatactgtactggacagctgcacaagccaccag
cctcctttggtgtatgttcagtcacgtgtctcaggtgatacacagctgctgctctcatca
agtattcaggatgttcgcttgtgggatgcctcttctataggcaatggaccattacatcca
tttgaagggtgcaaggctgctaggtttagcaattctgggagccattttgctgcactgatg
acagatttaagcaatagagagattctcctgtacgatatccagacctatcagatggagcta
aaattgtcagacacaacttttggatctacaggtcgggcgcacatgtattctcagatacac
ttcagtccatcagatacaatgttgctctggaatggtgtattatgggatcggcgagtttct
ggcccagttcatcgattcgatcaatttacagactatgggggtggtggctttcatcctgct
ggcaatgaggtcataataaactctgaggtgtgggatcttcggaaattcagactgctccgg
agtgttccttccctggatcaaacagcaataacatttaatgcacgtggtgacgtaatttat
gcaatcttgaggagaaaccttgaggatgtaatgtctgctgttcatactcgtcgtgccaag
catcctctttttgcagcatttcgcacagtcgatgctgtcaactatgctgacattgcaact
attccagtagatcgctgtgtccttgactttgcgacagaaccgacggattcatttgtggga
ttgatcacaatggatgatcaagaagagatgttatcttctgcgagggtctatgagattggt
cgacggaggccgacagatgacgactctgatcctgatgatgctgagagtgaggaagatgag
gatgaagaagatgaagaagtggatatagatcctatattgggcccgggtctagatggtgat
agtgatagtgaccctgataatatgagcaacgatgatgatagtatgagtgatcttgacgag
gatgatgaggaagatggggattttataatggatggttttgaattcgatggtgggcctgga
atattggaaattgtgactgagggagaggacgacgatgatgatgatggaagtcagatggtt
gaatctttcagtagtggtgatgaagaggatattctgcgcaatggctttggcttctaa
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integrated database retrieval system
