Rhodamnia argentea (silver malletwood): 115729480
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Entry
115729480 CDS
T10595
Name
(RefSeq) LOW QUALITY PROTEIN: SAC3 family protein B
KO
K23719
nuclear mRNA export protein SAC3
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115729480
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
115729480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
115729480
NCBI-ProteinID:
XP_030515928
UniProt:
A0A8B8N0M1
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All DBs
Position
1:complement(25325696..25338088)
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AA seq
1653 aa
AA seq
DB search
MAFPGSGFSREMGPSGSGPRSSATPFGSFPRPSPSPSQPPSNPPAPPPPPLFGASPVRSP
SPRRPEIRGATQLLPSSFGNGYRAPARPYTSSITLRPNESLPRLGRGQNPLYKYPDAQIS
QRPSSVASLVAARNQGSVTAGIARFQDPRRSNLPVTSPERDNLRNFSKYTLRSHFDAQPR
SPVGYEDIYDDFRPPYGEGQRTIFPKVTHSPQSIGNHYSPVPQGTQLALPSIRSSYSPQE
IPRFEEAQRPAPISTAWGSQPKSPSNYSDSVPHHDRNGSDNSGRGIPTDIIRVERTKRTR
SPPLSPMNDLQESSPLSEDNYNRSSMSLPVSSTKTGMIFSHPDSDVHQNVLSSSDIGLEA
PPNEQSYFPVPKRTRSPAPSDKDMQHNPTSSPEEIEREMQAKAKRLARFKVELSEPVQRS
SIIAEPNVSSVHHDLSMVHERKFVGETFNDVTGDFPSGSFDNGDLESSSNIVGLCPDMCP
ESERAERERKGDLDQYERLDGDRNQTSKSLAVKKYTRTAEREADLIRPMPVLLKTIDYLL
SLLDQPYDDRFLGLYNFLWDRMRAVRMDLRMQHIFDLEAVKMLEQMIRLHIIAMHELCEI
TKGEGFSEGFDAHLNIEQMNKTSVELFQLYDDHRKKGISIPTEKEFRGYYALLKLDKHPG
YRVEPGELSLDLAKMTPEMRQSPEVLFARDVARACRTGNFIAFFRLARKASYLQACLMHA
HFAKLRSQALASLHSGLQSNQGLPVAVVAQWLAMEEEDIESLLHYHGFSVMEYEEPYMVK
EGPFLHVDRDFPTKCSELVHLKKTTRIIKDILIPESICSFSKEATKFQLTSDLKHEMKNI
QPVEKDSSIHVSDQEMAISEDMAVSETISSPIEICRANIAFGSPKIAQHVEVDHKISGAG
FMPWNFPAVHNSSPKTAPINLCAKADSNFRNPLQISGLSGNELTPLPFSLSSVQQKVLPD
ESESNGAWQSSVSLEDDICNANEEAPHVHQENGMDEVYVNEDIYTNDKDEEVAEAKLTLI
LRIWKRRSARRRELREQRQLAAADALSSLSLGPPVQWKNDQPSSLNKFDIDQVTTERRGK
HRQSWSRLNVADVTAGELIKRNPNAKCLCWKIIICSQIESLDSEILERSFTHRSAVRWLL
AKIMAAGTEHPDLVFSSPSLSIWRKWVPCPPNMDLTCHLSVIEHISSDKSSMTIDGASAA
LFLLAESIPLEPQKIRLHQLITSFPSGSRLPLLILIDSCANLGSEDATCEIINKLGLHAI
DRSRVGSLSVVFLVEDKKLEYFDEFFSDQRLREGLHWLASMSPLHSPVHCVETRDLVLNH
LNSFLERLGKSGSEVGPDQCILALNEALDHVLGEVAAAADTNPSGWPCPEVSLLDEHCKE
SRIADCYLPSFGWNTSARIEPILSALRKCKLPHFSDDISWLRRGCRVGKEVESQRLQLEA
CLIRYLAQSSNVMGDAQARNEVSLMLQKHARLELRDSVYYIIPNWVMIFRRIFNWRLMIL
RKEELSECYVLEHVASQTSSSENMLQEDSHPYLENPSLDEMLEVGSANLSCLTSSSQPQI
SVPMTGSPIHGRDQTWDAVHVDDLPAAGRTTILQDNEMASVDDDAYRFSTLISNNDTPVN
FAKATDGSEKLSRLLQQCDLLQNVLDEKLSVYF
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttcctggatccgggttctcgagggagatgggtccatcgggttcgggcccgcga
agctccgcgaccccttttggtagcttccctcgcccttccccttcgccttcgcagccgcct
tcgaatcctcctgcccctcctcctcctcctctttttggtgcttctccggttcgatctccg
agtccgaggaggcctgaaattcgaggggccacacagttattgccttcgtcttttggcaat
ggctatcgggcacctgctcgtccttacacatcgtcaattactcttaggccaaatgagtct
ttgccaagattgggtagggggcaaaaccctttgtacaaatatcccgatgcacaaatcagt
cagaggccctcctccgtcgcctctttggttgccgcacgtaatcaaggaagtgtaactgcc
gggattgccagattccaagatccaagaagaagcaacttgccagtaacatctccagaaaga
gacaatttgaggaacttcagtaaatatactttaagaagtcattttgacgcacaaccacgt
tctcctgtaggctatgaagacatctatgatgattttcgtcctccttatggggaaggtcaa
cgtaccatatttccaaaagttactcactcacctcagagtatcgggaatcattactcacca
gttccacaaggaactcaattagcccttccaagtatcaggagtagttactcaccgcaagaa
attcctcgttttgaagaagctcaaaggcctgctccaatttccactgcatggggtagtcaa
ccaaagtctccaagcaactattccgactctgttcctcatcatgaccggaatgggtctgac
aattctggaagaggcattccaactgacatcataagagtcgaaagaacaaagagaaccaga
tctccgcctttgtcaccaatgaatgatctgcaagagagttcacctttatctgaggataac
tacaataggtcttcaatgtctctccctgtgtcaagtacaaaaacaggaatgattttcagt
caccctgattctgatgttcatcagaatgttctgtcatcttctgatattggcttggaagct
cctccaaacgagcaaagttactttccagttcctaaaagaacgaggtcaccagctccctca
gacaaggacatgcagcataaccccacttcttcacctgaggaaatagaacgggaaatgcag
gccaaggctaagcgtttagctcgatttaaagttgaattaagtgaacccgtacagcgcagc
tcgatcattgcagaaccaaacgtttcttctgttcatcatgatttatctatggtgcatgaa
agaaaattcgtcggagagacctttaatgatgtgacgggagattttccatctggaagcttt
gacaatggagatttggaatcctccagtaacattgtgggcttatgccctgatatgtgccct
gaatcagaaagggctgagcgagaaagaaagggggatcttgatcagtatgaacgtttagat
ggtgatagaaatcaaacaagcaagtctcttgctgttaaaaagtatactaggacagctgaa
agggaagcagatttgattaggccaatgccggtcctgctgaaaaccattgactatctactg
agtttgctagatcagccttatgatgataggtttctgggtctatacaactttctgtgggat
aggatgagagcagtcagaatggacctcaggatgcagcatatttttgaccttgaggccgta
aaaatgctggaacaaatgatacgacttcatattattgcgatgcacgaattgtgtgaaatt
actaaaggagagggcttttcagagggatttgatgcacacctgaacatagaacagatgaac
aaaacatcagtagaattgttccaactgtatgatgatcacagaaagaaaggaatcagcata
ccaacagaaaaagagtttagagggtattacgcgttgctcaagctggataagcatcctggt
tatagggttgaaccaggagagctttcccttgaccttgctaaaatgactccagaaatgagg
caatcgccagaagtgttatttgctcgtgatgtggcaagagcatgcaggactggcaatttt
attgcgttctttcgacttgcaagaaaagctagttatcttcaagcttgcctgatgcatgct
cattttgcaaagttacgatctcaagcacttgcttcgctacacagtggcctgcagagtaat
caaggtctccctgttgctgttgttgctcagtggctggcgatggaggaagaagacatagaa
agccttttgcattaccatggtttttctgtgatggagtatgaagagccatacatggtgaag
gaaggtccattcctccatgtagatagagacttccctacgaagtgttcagagcttgttcat
ctcaagaagacgaccaggataattaaggacatcttgattcctgagtcaatttgctcattt
tccaaggaagcaacaaagttccagttgacaagtgatctcaaacatgaaatgaagaatatc
caacctgttgagaaggatagttccatccacgtatctgatcaagaaatggctatttctgaa
gatatggctgtttctgaaactatatcatctccgatagagatttgtcgtgcgaacatagct
ttcggatccccaaaaattgctcagcacgtggaagttgaccataaaatctctggggcgggt
tttatgccatggaactttccagcggttcataatagctcacctaaaactgcacccattaat
ctgtgtgcaaaagcagactctaatttcagaaatcctcttcagataagtggtctttctgga
aatgaacttacgcccttgccattttcacttagttcagtccagcaaaaagtgcttccggat
gaatcggaaagtaatggtgcttggcaaagctcagtatctctggaggatgacatttgtaat
gcgaatgaagaagctccacatgttcatcaagaaaatggaatggatgaagtctatgtaaac
gaggatatttatactaatgacaaggatgaagaagttgccgaggcaaaactcacgttgatc
ttaaggatatggaagcggcgttctgccagaagaagggagttacgtgagcaaaggcaacta
gcggctgctgatgcattaagttcactgtctttgggacctccagttcaatggaaaaatgat
caaccaagcagtctcaacaagtttgacattgaccaagtcacaactgagagacgtggaaag
cacagacagtcatggtctaggctgaatgttgcagacgtgactgctggtgaactcatcaag
cgcaacccaaatgctaaatgcctgtgctggaagattattatttgttcacagatagaaagt
ctagatagtgagatactggagagaagtttcacccatcgaagcgcagtcaggtggttgctt
gcaaagattatggcagctggaacggagcatcccgatctggtcttttcctctccgtcactg
tcaatatggagaaaatgggtcccttgtccgcctaatatggacttaacctgccacttgtct
gtgattgagcatataagttcagataagtcaagcatgacaatagatggtgccagtgctgct
ctcttcctcttggctgaaagcatccctttggaacctcaaaagatacggcttcatcaactc
ataacatcattcccttctggctctagattgccgcttctgatcttaattgactcgtgcgca
aatctgggttcagaagatgccacttgtgaaatcattaacaagttgggcctccatgctatt
gaccgatcgagggtgggtagcctttccgtcgtcttccttgtagaagataagaaattggag
tactttgatgaatttttcagtgaccagcggctgagggaagggctgcattggctggcaagc
atgtcgccacttcattctccggtgcattgcgtagaaacacgtgacctagttcttaatcac
ctgaactctttcttggaaaggcttgggaagagtggctctgaagtgggccccgaccaatgt
atcttagcactcaatgaagccttggatcacgtgctgggagaagttgccgcagctgcagat
acaaatccctccggttggccttgccctgaggtttctttgctggatgagcattgcaaagaa
agcagaattgcagattgttacttgccaagttttgggtggaatacatcagctagaattgag
ccgattttgtccgctctaaggaaatgtaagcttccacatttcagtgatgacatttcgtgg
ttgagaagaggttgtagagtaggaaaggaggtcgagagtcagagactacaactagaagca
tgcttgatcagataccttgcccagtcaagtaatgtgatgggggatgcgcaagccagaaac
gaggtatctttaatgctacagaaacatgctcggcttgagcttcgggactcagtatactac
ataattccaaattgggtgatgattttccggaggatattcaattggaggttgatgattctg
cggaaagaggagctctcagagtgttatgtcctagaacatgttgcttctcaaacttcaagt
tctgagaacatgttacaagaagattcacacccttacttggagaatccatcgctagatgaa
atgcttgaagttggttccgccaacctgtcttgtctcacatcgagttctcagccacaaatt
tcagtgcctatgactggatcacccatccatggtagagaccaaacttgggatgctgtacat
gtcgacgaccttccagcagcaggtagaacgactattcttcaggataatgaaatggcttct
gtagatgatgatgcatataggtttagtacattgataagtaacaatgatacaccggtgaat
tttgccaaggccactgatggaagcgaaaaactgagtaggctattgcagcagtgtgattta
ctccagaacgtactagatgaaaagctatcggtgtatttctga
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