Rhodamnia argentea (silver malletwood): 115729498
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Entry
115729498 CDS
T10595
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Module
rarg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115729498
Enzymes [BR:
rarg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115729498
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
115729498
NCBI-ProteinID:
XP_048129473
UniProt:
A0ABM3GYN7
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Position
2:25487878..25491834
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AA seq
446 aa
AA seq
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MLDEGNKRLMKASSSNGEYLEHFAVCLLLFVALSTATCEASTTSTSFDVLGYGAVGDGKT
DDSSAFLEAWRATCESPSKLSILDVPAKKTFLLKPVTFSGPCQPDYVYVLFLNFTRPKVS
GNIAASSSKTEYSGLPINSWLVFSNVDGLMVTGTGIIDGRGSGWWSQSCIGNASNDATCK
GPTPTYFDFYDACANVVQALTFYRCKRLVLNGLRHVNSPRTHITLSSCKFATISNTHISA
PATSPNTDGIDISDSTLVQVRDSFIGTGDDCIAVSGGSSHINVTRITCGPGHGISIGSLG
AHGENDTVENVIVQNCTLKGTMTGVRIKTWQGGLGYARNISFNKIRFIRVDNPIIIDQYY
CPTKVDCQNKTSGIRVSDISYSAIYGTSVTDKVINLSCDQNFGCSNIVLDHVYIKSTVPK
TKAYPYCFNAHGRYSHTKPAVTCLLE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgttggatgaaggcaacaagcgtttgatgaaggcatcgtcgagtaatggggaatatctg
gaacattttgccgtgtgtttgctcttattcgtcgcactgagcacggcgacttgtgaagcg
agcacaacatcgacttccttcgatgttttgggttacggagcggttggcgatggaaagacg
gacgattcctcggccttcctggaggcatggagagccacctgtgaatccccatcgaagctg
tccattctcgacgttccggcgaagaagactttcttgttgaagcctgtgacgttcagcggc
ccatgccaacccgattacgtgtatgttctgtttctcaatttcactcggccgaaggtctcc
ggcaacattgctgcgtccagctcaaagacagagtacagtggcttaccgatcaatagttgg
cttgtcttctctaacgtggacggtttaatggtcaccggcactggaatcatcgacgggagg
ggttccggctggtggtcacagtcttgcattggaaacgcatctaacgatgcaacatgcaaa
ggaccaacaccgacatactttgatttctatgatgcatgtgcaaacgtggtacaggcattg
acattttatagatgcaagagactcgtgctcaatggattgagacatgtgaacagtccaagg
acacacatcaccctcagcagctgcaagttcgccaccatctccaacacccatatctctgcc
ccggcaacaagccctaacaccgatgggatcgacatctccgactcgacccttgtacaagtt
cgcgattccttcatcggaactggtgatgattgcatcgctgtaagcggaggctcgtcacac
atcaatgtcactaggatcacatgtggacctggccatggtatcagcattggatctttagga
gcacatggagagaatgacacagttgaaaatgtgattgtgcaaaactgcacattgaaaggt
acgatgacaggagtgagaatcaagacatggcagggagggcttggatatgcaagaaatata
tccttcaacaagatcagattcattcgggttgataacccgatcatcatcgaccagtactac
tgccccaccaaagtcgattgtcaaaacaagacatcgggaattagggtgagcgacatctcg
tattcggcgatatatgggacgtcggtcacagacaaggtcataaacctgagctgtgaccag
aacttcggttgcagtaacatcgtgctggaccatgtttacataaagtccaccgttccgaag
acgaaagcttatccctactgcttcaatgctcatggaagatatagccacaccaaacctgca
gtcacttgcttgctggagtaa
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