KEGG   Rhodamnia argentea (silver malletwood): 115729609
Entry
115729609         CDS       T10595                                 
Name
(RefSeq) LOW QUALITY PROTEIN: PH-interacting protein-like
  KO
K11797  PH-interacting protein
Organism
rarg  Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rarg04121]
    115729609
Ubiquitin system [BR:rarg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     115729609
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_TEP1_C Bromodomain Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_DCAF4 Agenet TriTu
Other DBs
NCBI-GeneID: 115729609
NCBI-ProteinID: XP_048132889
LinkDB
Position
1:complement(5657225..5677761)
AA seq 1778 aa
MMDFPKCASSVGAISSGMGPLIFYNKVHELVETGRPVRASGHAVETDVDVDLNEIYFLIM
HFLSIGPCQRTFGQLWNEVLEHQLLPRRYHAWASRSGIRSGNEDDDGISFPLNYSNLVER
CPHIGKDHLVKLLKQLMRHTGHLVHDKVGIDALSAADVPTLLGVGSFSLFDGMSKINKQL
KRLPAYLCWPHMRADQVRXYVGGFRKHHRAPSIHSACYAIVKPLMLVERMQNIKKLRGRR
VAVYCATFDWSGRYVITGSDDRLVKIWSMETAFCLASCQGHEGDITDLAVSLKNALVASA
SNDFVIRVWRLPDGFPISVLRGQTGAVTAIAFNPRPSAVYQLLSSSDDGTCRLWDARYSH
CTPRLYLPKPPDAIAGQSNGPSNNELSSSIAPQCHQILCCAYNANGTVFVTGSSDSFARV
WNACKSNADNPERPVHEMDVLCGHENDVNYVQFSGWSVAPRSSMSDNLKEDNFPKFRNSW
FCHDNIVTCSRVGSAIIWVPRSRKSNGKGGRWVRAYHLKVPPPPLPPQPPRGGPRQRFLP
TPRGVNMIVWSLDNRFVLAAIMDCRICVWNAGDGSLVHCLTGHSASVTXVLDIHPFNPRI
AMRVGYDGKAIVWDLSFIIWEGRPIRVYEIGRVKLVDGKFSPDGTSIALSDDYGQIHLIN
TGEGKSQKDAKYDQFFLGDYRPXIRDTVGNVLDRESQLPPHRRNVQDPLCMVPYPGPYQT
TYQQXRLGALGIEWRPPTIRFVAGPDFTLGQEYQMLPLADLERMIEPLPEFIDAVFWEPK
NEIFSEDNDSESNVTEESEGERGSLSAGFFSDPECTAGDSDTKQSHRDSRRRAGRKKHRT
EAILCMLKSIPFSFSLSFFIFLGVNLASYALKVEWVTSSGRRVKKRNLEECEGSASRDTQ
NKKSENRRKSSGRLSIKAHNLRPQHVAAWNALNMICEIIDMSTEGENIENSGDSLSESEL
QGLNRNKERDDSDRNFPAQKEGGKGKEPITKPDELREYQSNAGNRKRLVLKFSLRDTKKV
VPSENTRMIMHNDADLLNVPPHLSQEMTENMNATTSNDVASHFVNSSNVHEDKEVPENID
DVLIASAGDNENEIRWGEVKMRSSVRLRSDLLPTDASEGTRGRWANKENETDLNRGEEKC
GADAFQPGELTRTDDHANLEGAHTFSSADFPPESQPDGNSGAVVEDPPQRSTALRIKTRG
PSKVKSTEVEGSTGDASNRNIKHPPHAEHSQNPESPEEAPFAERLTSMEPLHLNSKAVVS
DTDLDRERPQSSDTDAEDLGIPDNIAINYPEVATDAIHRARSLKMKATSTEPEIIHHSFK
VRGQETSGTSKFAETSSRKARDPLVYKDWVSSSKMMVRPRSSRNKRGESNNNDQGFPWGE
KSSQNLRKKSWLXGYRYTPQLGDEVVYLRQGHQEFIESSCLRDVGPWRSLRGSLSAVEVC
KVEALDCANSPGSGESCCKLTLKFVNHVSNVFGRRVKLMLPELINFPAFLVEKTWYDNSM
QRKWSLXDKCLVWWRNESGTGGSWWEGRITTVQVKSPEFPDSPWERYXVCYRTDPPEKHL
HSPWELHDLEVSWDHPHIDPETRDELLSMFSKLERSVGKNQDYYGYQKLXKAAQKLDFSS
STPLMFRFRRCPVGLDPELIQLRLENNYYRRVEAVKHDITELMRNAQSYFVTNAESSVEM
RRLSDWFTKTLTGFYILVFLFKLQLGSEKYASAAAANGCTLSEQLASVNEESMRIFKEYI
TKHNVPTDVPDDLVESSPEDDVEATKKPPANSKETKLN
NT seq 5337 nt   +upstreamnt  +downstreamnt
atgatggatttcccgaagtgtgcttcttctgttggagcaatttcttctggcatgggacct
ttgattttctataataaggtgcatgaactggttgaaaccggaaggccagtgagagcttct
ggtcatgctgttgagactgacgtcgatgtagacctcaacgaaatatacttcttgatcatg
cattttctgtcgattggtccatgccagaggacctttggccaactctggaatgaagttttg
gagcatcagctgcttcctagaaggtatcatgcttgggcttctaggagtggaataagaagt
gggaatgaggatgatgatggcatctctttccctttaaattacagtaatctggtggaaagg
tgtccgcacattgggaaagaccacttggttaagcttctcaagcaactgatgcggcatact
ggccatttagtgcatgacaaggttggaatagatgcactcagcgctgctgatgttccaacg
ttgctgggagttggttccttttccttgttcgatggtatgagcaagatcaataagcaactt
aagcgtctaccagcttacttgtgctggccacatatgcgggctgatcaggtccgcnnatat
gtgggaggttttagaaagcaccatcgtgccccatcaattcactctgcatgttatgccatt
gtaaagccattgatgttggtcgaaaggatgcaaaatattaagaagctaaggggacgtcga
gttgctgtctattgtgcaacattcgattggtcaggaagatatgtcatcacggggtcagat
gatcgtcttgtgaagatctggtcaatggaaactgcgttttgtttggcaagctgccaggga
catgaaggtgatattaccgatctagctgtaagtttaaagaatgccctggtggcatctgct
tcaaatgacttcgttattcgagtttggcgcttacctgatggattcccaatctcagtcctg
cgggggcaaactggagctgtcactgctattgcatttaatcccaggcccagcgcagtatat
cagctattatcgtcatcagatgatggaacttgtcgactctgggatgctaggtattctcac
tgcactccaagattatacctgccaaaaccaccagatgctattgccggtcagagcaacggt
ccttcgaacaatgaactttcttctagtattgccccacaatgccaccaaatactatgctgc
gcttacaatgccaatggaactgtatttgtgactggtagctctgacagctttgcaagggtc
tggaatgcttgtaaatccaacgcagacaatccagaacgaccggttcatgagatggatgtg
ttatgtgggcatgagaacgatgtcaattatgtccagtttagtggttggtctgtggctccc
cgatcgtcaatgtctgataatttgaaggaggataattttccaaagtttagaaactcatgg
ttctgtcatgacaacattgtcacttgttctcgtgttggaagcgcaattatatgggtgccg
agatcccgcaaatccaatggaaaaggtggacgttgggtgcgagcgtaccatttgaaagtt
ccacctccccctttgccgcctcaacctcctcgaggaggtccacgtcagagatttcttccg
actcctcgtggtgttaatatgattgtgtggagtttggataatcgctttgttcttgcagct
attatggactgtcggatatgtgtgtggaatgctggtgatggtagtttagttcattgtttg
accggtcatagtgcctccgtaacctaagtgctagatattcatccattcaatccccggata
gctatgagagttgggtatgatggaaaagcaattgtttgggatctgagttttatcatatgg
gaaggcagacctattcgggtgtatgaaattgggcgcgtgaagctggttgatggaaagttt
tctccggacgggacttcaattgcactttctgacgattatgggcaaatacatctcataaac
actggtgaaggcaaatcccaaaaggatgccaaatatgatcagttcttccttggggactac
cgccccnttatacgtgacactgttggaaacgttcttgatcgggagtcacaacttccaccg
catcgaagaaatgttcaggatcctctttgtatggttccatatccaggaccctatcaaact
acataccagcaatgacgacttggtgctttgggtattgagtggcgtcctcctaccattaga
tttgttgctggccctgactttactcttggtcaggagtatcagatgctgcccttagcggat
ttggaaaggatgattgaacctttacctgagttcattgatgccgttttctgggaaccgaaa
aatgaaattttcagtgaagataatgactcggagtccaacgttactgaggaaagtgaaggt
gagaggggtagtttaagtgctggatttttcagtgatcctgagtgcacggcaggagacagt
gataccaaacaaagccatagagatagccgccgtagggcaggaaggaaaaagcatagaact
gaggcaattctttgtatgcttaagtcgattcctttttctttttctctttcttttttcatt
ttcttgggagtgaatctagcctcatatgctcttaaggttgaatgggtaacttcgtcagga
aggcgtgtcaagaaaaggaacttggaagaatgtgaaggctctgcatccagggatactcaa
aataaaaaatcagaaaatcgcaggaaatcttcagggaggctgtctatcaaagcacataat
ttgaggccccagcatgttgcagcatggaatgctttgaacatgatttgtgaaatcattgat
atgtctactgaaggagaaaatattgaaaactcaggagactcattgtccgagagtgagtta
caggggcttaaccgaaacaaagaaagagacgatagtgacaggaacttccctgcacagaag
gaaggtggaaaaggcaaagaaccaatcaccaaacctgatgaattgcgtgagtaccaatca
aatgctggaaacaggaaaagattggttctgaagttttcacttcgtgacactaagaaagtt
gtgccttcagaaaacaccagaatgataatgcacaacgatgctgatctcctgaatgtacct
cctcatctttctcaagaaatgacagagaacatgaatgctacgacatccaatgatgtagct
tctcattttgtgaattcgagtaatgtacatgaggataaagaagtacctgaaaatattgat
gacgtcttgattgcatctgccggtgacaatgagaatgagatcagatggggagaagtcaag
atgcggtcatcagtgcgtctgagatcagaccttttgccgactgatgcatcggaaggaact
aggggaaggtgggcgaataaggaaaatgagactgatctgaataggggtgaggagaagtgt
ggagctgatgcattccaacctggggagctcacaagaacagatgaccatgctaatcttgag
ggtgcacatacattttcatcagctgactttccaccggagagccaaccagatggaaattca
ggtgcagttgtagaggatcctccacaaagatcaactgctttaagaatcaaaacaaggggt
ccatcgaaagtgaaatccactgaagtcgaaggttcaactggcgatgcaagcaataggaac
ataaaacatcctccacatgcggagcacagtcaaaaccccgaatctcccgaagaggctcca
tttgctgaacggttgacctccatggagccactgcacttgaattcaaaggcggtggtgtct
gatacagacttggacagggaaaggccacagagctctgacacagatgcggaagatcttggg
atccccgataatattgctatcaactaccctgaagttgcgaccgatgcaatacatagagca
aggtccttgaagatgaaggcaacatccacagagccagaaatcatccaccacagtttcaag
gttagaggacaggagacttcagggacatcgaagtttgcagagacatcctcaaggaaagca
cgtgatccgcttgtatataaagattgggtgtccagttcaaaaatgatggtcagaccaagg
tctagtaggaataaaaggggcgagagtaataataacgatcaaggtttcccttggggggaa
aagtcaagccagaatctcaggaaaaagtcatggctgnagggttatcgctatacacctcag
ttaggcgatgaagttgtttacttgagacagggacatcaagagttcatcgaatcgagttgc
ttgcgagatgttggcccttggaggtcgcttagagggagtctgagtgctgtggaagtttgc
aaggttgaagctcttgattgtgccaatagtccaggctctggggagagctgctgtaaactg
actcttaaatttgtgaatcatgtttctaatgtgtttggacgcagagtcaagttgatgttg
ccagagctgatcaattttcctgcttttctggttgaaaagacatggtatgataattctatg
cagagaaagtggagccttnaggataagtgccttgtatggtggagaaatgagagtgggaca
ggaggaagttggtgggagggtcgaataacaactgtacaagttaagtcacctgagtttcct
gacagtccgtgggaaagatacnntgtttgttacaggactgatcctcctgaaaaacatctg
cacagtccttgggaattacatgatcttgaagtatcctgggatcatcctcatatagatcct
gagacccgagatgaactcctgtccatgttttccaagctagagcgttcagttggcaagaac
caggactactatggctatcaaaagttgnaaaaagccgctcagaaattggatttttcaagt
agtacccctttaatgtttcgatttcgcagatgtccagtaggtttggatccagaactgatc
cagctgaggttggagaacaactattatcggagagtggaagcggtgaagcatgacataacc
gagttgatgcgcaatgctcaatcatacttcgtaacaaacgctgagtcgtctgtcgagatg
aggcgcctgtctgattggtttaccaagacattgacgggattttatattctcgtgttcctt
ttcaaacttcaacttggatcagaaaaatatgcctctgcagcagctgctaatggctgcact
ctttcggagcaactggcttcagtgaatgaggaaagcatgaggatattcaaggaatacatc
accaaacataacgtccccactgatgttccggacgaccttgttgagagctctcccgaagat
gatgttgaagccaccaagaagccaccagcgaactcaaaggaaacaaaattaaattaa

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