Rhodamnia argentea (silver malletwood): 115729625
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Entry
115729625 CDS
T10595
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115729625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rarg02000
]
115729625
Transporters [BR:
rarg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115729625
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
nSTAND3
Motif
Other DBs
NCBI-GeneID:
115729625
NCBI-ProteinID:
XP_048142031
LinkDB
All DBs
Position
10:14415320..14439857
Genome browser
AA seq
1890 aa
AA seq
DB search
MGDSWRQLKVMLRKNWLLKIRNPFVTAAEILLPTIVILLLVAVRTRVDTQIHPAQSHIRK
GMLVEIGKGISPNFQQVLELLYSDREFLAFAPDTEETRRMIDWMSIKFPLLKLVHKIYKD
EEELETYIRSDIYGTCSEIENCSNPKIKGAVAFHGQGPHIYDYSIRLNHTWAFSGFPNPK
TIMDTNGPFLNDLHLGVNIIPTMQYSSSGFFTLQQVLDSFILLSAQQTQADMLNMTIEPL
SKSSERSSSLDLSWKQFIPSDIRIVPFPTREYTDDEFQSIIKTVMGVLYLLGFLYPISRL
ISYSVFEKEEKIKEGLYMMGLKDGIFHLSWFITYSLQFAISSGIITVCTMDNLFKYSDKS
VVFVYFFSFGLSAIMMSFMISAFFTRAKTAVAVGTLSFLGAFFPYYTVNDEGVPMILKVI
ASLLSPTAFALGSVNFADYERAHVGLRWSNIWLASSGVNFLVCVVMMLFDSILCCLIGFY
LNKVLTGERGVLYPLDFILDKGFRRKKNSPKHQVVSVEVHDKSKVLKKRAAFPGIDSEPA
IESISMEMKQQELDQRCIQIRNLHKVYATKKGTCCAVNSLQLTLYENQILALLGHNGAGK
STTISMLVGLLSPTSGDALVLGRNITTEMDEIRKCLGVCPQNDILFPELTVREHLEIYAV
LKGVGEDLLERVVTDMVDEVGLADKINTCVRALSGGMKRKLSLGIALIGNSKVIILDEPT
SGMDPYSMRLTWQLIKKIKKGRIVLLTTHSMDEADELGDRIAIMANGSLKCWGSSLFLKH
QFGVGYTLTLVKSAPTASVAADIVYRHIPSAICISEVGTEISFKLPLASSPFFESMFREI
EGCMKRSMSSSRKLGVDENLGIESYGISVTTLEEVFLRVAGCDYDVAETAAEENISVSTN
NNSSQDSCGSTAKMTFHNKVCGCYKKALWILPALIGKACSFFVAGILSLLSCFSMQCCSC
SIISRSIFWQHCKALFIKRAISARRDRKTIVFQLLIPAVFLFLGLLLLKLKPHPDQQSIT
YTTSHFNPLLSGGGGGGPIPFDLSWPIANEVAQHVEGGLIQRFKPTTYKFPDSQQALVDA
VEVAGPNLGPALLSMSEYLMSSFNESYQSRYGAVVMDDQNDDGSLGYTVLHNCSCQHSAP
TFINLMNSAILRLATQDENMTIRTRNHPLPMTVSQRVQRHDLDAFSAAIIINIAFSFIPA
SFAVSIVKEREVKAKHQQLISGVSILSYWTSIYTWDFVSFLFPSSFAIALFYIFGLDQFI
GAGSFLPTVLMFLEYGLAIASSTYCLTFFFTDHTMAQNVVLLVHVFTGLILMVISFIMGL
IQTTRSTNDFLKNFFRVSPGFCFADGLASLALLRQGMKDNSSRGTYYDWNVTGASLFYLG
VESIVYFALTLGLEQFPSHKLTLAAVKESWQKIMKNHSDNSASYSEPLLKSSSKSGSLDY
DEDSDVLMERKRVLSGSIDNAIIYLRDLRKVYSGSNHHGIKVAVHSLTFSVQEGECFGFL
GTNGAGKTTTLSMLTGEEYPTGGTAFVFGKDIRSNPKAARRHIGYCPQFDALLDYLTVQE
HLELYARIKRVADQKINDVVMEKLVEFDLLKYAKRPSFTLSGGNKRKLSVAIAMIGDPPI
VILDEPSTGMDPIAKRFMWDVISRLSTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLR
CIGSPQHLKTRFGNHLELEVKPTEVDPNDLVNLCQIIRGKLFDIPQPRRLLDGLEVCIGA
MDSITAENATVAEISLSKEMIMTVGHWLGNEERTRTLLMEVHLSDGVVGEQLSDQLFRDG
GIPLPIFCEWWLTKEKFSVIDSFVVSSFPGAKFQNCNGLCVKYQLPYGEGSSLANAFGHL
ERNRNRLGISEYSISQSTLESIFNRFAANA
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgggggactcttggaggcagctgaaggtcatgcttcgcaagaactggctcctcaagata
cgcaaccccttcgtcaccgccgctgagattttgcttcctacgatcgtcattttgttgctg
gtagcagtcaggacgcgagtggacacacagattcatccggcgcaatcgcacatccggaag
gggatgttagtggaaattggcaaagggatatcccctaattttcagcaagttttggaattg
ctatactcggatagagagtttttggcttttgcacccgacacagaagagaccagacggatg
attgattggatgtccataaaatttcccttactgaagctcgtacataaaatatacaaggat
gaagaagagctagaaacctacatacggtcagacatctatggtacctgcagcgagattgag
aactgttcaaatcctaaaattaaaggagcagtcgcgtttcatggtcaaggccctcatata
tatgactacagtatacgcctcaaccatacatgggctttttcggggtttcccaaccctaaa
accattatggacaccaatggcccattccttaatgacttgcatttgggtgttaatatcata
ccaacgatgcagtatagctccagtggattttttactcttcaacaggtcttagattcattt
atccttctgtccgcccagcaaacccaggccgacatgctgaatatgaccattgaacctttg
tcaaaatcatccgagagatcttcctcacttgatctatcttggaagcaattcattccctcc
gacataaggatagtgccatttccaactcgtgaatacactgatgatgaattccagtctatc
atcaagacagtgatgggagtattgtaccttttgggttttctctacccaatttctcgccta
atcagctactctgtgtttgagaaggaagagaagataaaagaaggtctctacatgatgggt
ttgaaagatgggatatttcatctgtcttggtttattacatattctttgcagtttgcaatt
tcctctggaattatcactgtttgtacaatggacaaccttttcaagtacagcgacaaatcc
gtggttttcgtgtacttcttctcctttggactcagtgcaatcatgatgtcgtttatgatt
tctgcatttttcacaagagcaaaaacagctgttgcagttggtaccctttcttttcttggg
gccttctttccttattacacggtgaatgatgaaggtgttcctatgattctaaaagtcatt
gcttctctgctttcaccaacggcctttgctttggggtctgttaactttgctgattatgaa
cgtgctcatgttgggctccggtggagcaacatttggctggcatcatctggagtgaatttt
ctggtctgtgtagtaatgatgttgttcgactcaattttgtgttgtctgattggtttttac
ctgaataaggtccttacgggtgagcgtggagtgctttaccctttggattttatacttgac
aagggattcagacggaaaaagaatagtccaaagcaccaagttgtcagtgtggaagtacat
gacaaaagtaaagttttgaagaagagggctgcttttcctggaatagatagcgaacctgct
atcgaatcaataagcatggaaatgaaacaacaggagcttgatcaacgatgcatacagatt
aggaacttgcataaggtgtacgccacaaagaaggggacgtgttgcgcagtgaactcactg
cagctaaccctgtacgagaatcagatactagctcttctaggacataatggagctggtaag
agcacaacaatttcgatgcttgttggacttctttctcccacatcaggggatgctttggtg
cttggccgaaatattacaacagaaatggatgagataaggaaatgtctgggagtttgccct
cagaatgatatcctttttcctgaactgactgttcgggagcacttggaaatatacgcggta
ttaaagggtgtcggggaagatctactggagcgtgttgtgactgatatggttgatgaagta
ggcttggctgataaaatcaacacctgcgtgagggctctttctggtggaatgaagagaaaa
ttgtctcttgggattgctctgataggaaacagtaaggttatcattcttgatgaaccaact
agtggaatggatccatattccatgcgattgacatggcaattaattaaaaaaatcaaaaaa
ggaaggatagtactattaactacacattcaatggatgaagcagatgagctgggagaccgg
attgccataatggctaatggttcgttaaaatgctggggaagttcccttttcttgaagcat
caatttggggtgggctatacacttactttggtgaagtctgctccaactgcatctgttgct
gctgatattgtgtaccgtcatattccatcagcaatatgtataagcgaggttggaactgaa
atttccttcaagcttcctttggcatcttctccttttttcgagagtatgtttagggaaatt
gaaggttgcatgaagagatcaatgtcttcctcacgaaaattaggtgttgatgaaaatctt
ggcatagaaagctatggtatatctgtcacaacattggaggaagtattcctaagagtagct
ggatgtgattatgatgtagctgaaacggctgcagaggagaacatctctgtttcaactaac
aacaattcctctcaagattcttgtggcagtactgcgaaaatgaccttccacaataaagtc
tgtggatgctacaaaaaggccttgtggattctgcctgccttaatagggaaagcttgcagt
ttttttgttgcgggaattttaagcttattgagttgctttagtatgcagtgctgtagttgt
tccatcatttcaaggtccatattttggcaacattgtaaagctttgttcataaagagggcc
atttcagcacggagggaccgcaaaacaattgttttccagcttctgataccagcagttttt
ctatttcttgggcttctactgctgaagcttaagccacatcctgatcaacagtccatcact
tacacaacttcacattttaatcctttactgagtggtggtggaggtggtggtccaatccct
tttgatctatcatggcctatagcaaatgaggtagcccaacatgttgaaggaggattgatt
cagagattcaaaccgactacatataagttccctgattcccagcaggcattggttgatgca
gttgaggtagctgggcctaatttaggaccagctttactttccatgagtgaatatctcatg
tctagtttcaatgaatcctaccagtcaaggtatggggctgttgtgatggatgatcaaaat
gatgatggaagtttaggttacactgtgctgcacaattgttcttgtcaacattctgctccg
actttcatcaatttgatgaattccgcaattcttaggctagctacgcaagacgaaaacatg
actattcgaactcgcaatcaccctcttccaatgacagtgagccagcgggtgcagcgtcat
gatctggatgctttctcggctgcaattataattaatattgcgttctcatttattcctgct
tcatttgcagtttctattgtgaaggagcgggaagtgaaagctaaacaccagcaactaatt
agtggggtttcgatactctcatattggacgtccatctacacatgggacttcgtcagcttc
ttattcccttcatcttttgcaattgctctcttctacattttcggtttggatcaatttatt
ggagccggtagctttcttccaacggtcctgatgtttttggagtatggcctggcaattgct
tcgtcaacatattgcctcacgttcttctttacggaccataccatggcacagaatgtggtt
cttctggttcacgtcttcactggtctcattctcatggtcatctcattcatcatggggctc
atacagacaacaagaagcacaaatgattttctcaagaacttctttagagtgtcgccaggg
ttttgttttgctgatggacttgcttcactagctcttttacggcaagggatgaaggataac
tccagcagagggacttattatgattggaacgtgactggcgcctctcttttttaccttggt
gtagagagtattgtgtacttcgcattgactcttggacttgaacaatttccttctcacaag
ctgacgttggctgctgtcaaagagtcttggcaaaaaattatgaagaaccattctgataac
tctgctagttactcggagcctctcctaaaatcctcttccaaaagtggttctcttgattat
gatgaagacagtgatgtcctaatggaacggaaaagggtactttcaggttccattgataat
gccatcatctacttgcgggaccttaggaaggtgtactctggaagtaaccatcatggcata
aaggtggcagtacattctttgaccttttcagttcaagaaggagaatgctttggttttttg
gggacaaatggagcagggaagacgacaacactatcaatgctgactggggaggaatatcca
actggtggaactgctttcgtatttggcaaagatatccgctccaatcccaaggccgctcgg
cgacatattggttattgcccgcaatttgatgcgctgttggattatctcactgtccaagag
catcttgagctttatgcaaggataaaaagagtcgcagaccaaaagattaatgatgttgta
atggagaagttagtggagtttgacctgcttaaatatgcaaaaagaccatcatttactctc
agtgggggaaacaagcgcaaattatctgttgcaatcgcaatgattggggatcctcctata
gtcattctcgatgagccctctacaggtatggaccccattgccaaacggttcatgtgggac
gtgatatcccgtttatcaaccagacgaggaaagactgcagttattctaaccactcatagt
atgaatgaagctcaagctttatgtacgaggattggaataatggttggaggccgattaaga
tgcatcgggagtccccagcatttgaaaactcgttttggcaatcatcttgagttagaggtt
aaacctaccgaagtcgaccccaatgacctggtcaacctttgccaaattattcgaggaaaa
ctttttgatattcctcagcctagacgcttacttgatggcctcgaagtttgcattggggcc
atggactccattactgcagaaaatgcaacagtggcagagattagcttgtcaaaagaaatg
ataatgacagttggacactggcttggcaatgaagaaaggaccaggacacttctaatggag
gtacacctttctgacggggttgttggagaacagttgtccgaccagttgtttcgagatggt
ggcataccgttgcccattttttgcgagtggtggttaaccaaagaaaagttttcagtcatt
gactcatttgttgtatcttcctttcctggtgcaaaattccagaattgcaatgggttgtgt
gtcaaatatcagttgccatacggagaaggatcctcacttgccaatgcttttgggcatttg
gaaagaaacaggaaccgattgggaatatccgaatacagtattagtcaatctactttggaa
tccatattcaaccgttttgcagcaaatgcctga
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