KEGG   Rhodamnia argentea (silver malletwood): 115729625
Entry
115729625         CDS       T10595                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter A family member 1
  KO
K05643  ATP-binding cassette, subfamily A (ABC1), member 3
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    115729625
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rarg02000]
    115729625
Transporters [BR:rarg02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    115729625
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 R1_ABCA1 RsgA_GTPase AAA_29 nSTAND3
Other DBs
NCBI-GeneID: 115729625
NCBI-ProteinID: XP_048142031
LinkDB
Position
10:14415320..14439857
AA seq 1890 aa
MGDSWRQLKVMLRKNWLLKIRNPFVTAAEILLPTIVILLLVAVRTRVDTQIHPAQSHIRK
GMLVEIGKGISPNFQQVLELLYSDREFLAFAPDTEETRRMIDWMSIKFPLLKLVHKIYKD
EEELETYIRSDIYGTCSEIENCSNPKIKGAVAFHGQGPHIYDYSIRLNHTWAFSGFPNPK
TIMDTNGPFLNDLHLGVNIIPTMQYSSSGFFTLQQVLDSFILLSAQQTQADMLNMTIEPL
SKSSERSSSLDLSWKQFIPSDIRIVPFPTREYTDDEFQSIIKTVMGVLYLLGFLYPISRL
ISYSVFEKEEKIKEGLYMMGLKDGIFHLSWFITYSLQFAISSGIITVCTMDNLFKYSDKS
VVFVYFFSFGLSAIMMSFMISAFFTRAKTAVAVGTLSFLGAFFPYYTVNDEGVPMILKVI
ASLLSPTAFALGSVNFADYERAHVGLRWSNIWLASSGVNFLVCVVMMLFDSILCCLIGFY
LNKVLTGERGVLYPLDFILDKGFRRKKNSPKHQVVSVEVHDKSKVLKKRAAFPGIDSEPA
IESISMEMKQQELDQRCIQIRNLHKVYATKKGTCCAVNSLQLTLYENQILALLGHNGAGK
STTISMLVGLLSPTSGDALVLGRNITTEMDEIRKCLGVCPQNDILFPELTVREHLEIYAV
LKGVGEDLLERVVTDMVDEVGLADKINTCVRALSGGMKRKLSLGIALIGNSKVIILDEPT
SGMDPYSMRLTWQLIKKIKKGRIVLLTTHSMDEADELGDRIAIMANGSLKCWGSSLFLKH
QFGVGYTLTLVKSAPTASVAADIVYRHIPSAICISEVGTEISFKLPLASSPFFESMFREI
EGCMKRSMSSSRKLGVDENLGIESYGISVTTLEEVFLRVAGCDYDVAETAAEENISVSTN
NNSSQDSCGSTAKMTFHNKVCGCYKKALWILPALIGKACSFFVAGILSLLSCFSMQCCSC
SIISRSIFWQHCKALFIKRAISARRDRKTIVFQLLIPAVFLFLGLLLLKLKPHPDQQSIT
YTTSHFNPLLSGGGGGGPIPFDLSWPIANEVAQHVEGGLIQRFKPTTYKFPDSQQALVDA
VEVAGPNLGPALLSMSEYLMSSFNESYQSRYGAVVMDDQNDDGSLGYTVLHNCSCQHSAP
TFINLMNSAILRLATQDENMTIRTRNHPLPMTVSQRVQRHDLDAFSAAIIINIAFSFIPA
SFAVSIVKEREVKAKHQQLISGVSILSYWTSIYTWDFVSFLFPSSFAIALFYIFGLDQFI
GAGSFLPTVLMFLEYGLAIASSTYCLTFFFTDHTMAQNVVLLVHVFTGLILMVISFIMGL
IQTTRSTNDFLKNFFRVSPGFCFADGLASLALLRQGMKDNSSRGTYYDWNVTGASLFYLG
VESIVYFALTLGLEQFPSHKLTLAAVKESWQKIMKNHSDNSASYSEPLLKSSSKSGSLDY
DEDSDVLMERKRVLSGSIDNAIIYLRDLRKVYSGSNHHGIKVAVHSLTFSVQEGECFGFL
GTNGAGKTTTLSMLTGEEYPTGGTAFVFGKDIRSNPKAARRHIGYCPQFDALLDYLTVQE
HLELYARIKRVADQKINDVVMEKLVEFDLLKYAKRPSFTLSGGNKRKLSVAIAMIGDPPI
VILDEPSTGMDPIAKRFMWDVISRLSTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLR
CIGSPQHLKTRFGNHLELEVKPTEVDPNDLVNLCQIIRGKLFDIPQPRRLLDGLEVCIGA
MDSITAENATVAEISLSKEMIMTVGHWLGNEERTRTLLMEVHLSDGVVGEQLSDQLFRDG
GIPLPIFCEWWLTKEKFSVIDSFVVSSFPGAKFQNCNGLCVKYQLPYGEGSSLANAFGHL
ERNRNRLGISEYSISQSTLESIFNRFAANA
NT seq 5673 nt   +upstreamnt  +downstreamnt
atgggggactcttggaggcagctgaaggtcatgcttcgcaagaactggctcctcaagata
cgcaaccccttcgtcaccgccgctgagattttgcttcctacgatcgtcattttgttgctg
gtagcagtcaggacgcgagtggacacacagattcatccggcgcaatcgcacatccggaag
gggatgttagtggaaattggcaaagggatatcccctaattttcagcaagttttggaattg
ctatactcggatagagagtttttggcttttgcacccgacacagaagagaccagacggatg
attgattggatgtccataaaatttcccttactgaagctcgtacataaaatatacaaggat
gaagaagagctagaaacctacatacggtcagacatctatggtacctgcagcgagattgag
aactgttcaaatcctaaaattaaaggagcagtcgcgtttcatggtcaaggccctcatata
tatgactacagtatacgcctcaaccatacatgggctttttcggggtttcccaaccctaaa
accattatggacaccaatggcccattccttaatgacttgcatttgggtgttaatatcata
ccaacgatgcagtatagctccagtggattttttactcttcaacaggtcttagattcattt
atccttctgtccgcccagcaaacccaggccgacatgctgaatatgaccattgaacctttg
tcaaaatcatccgagagatcttcctcacttgatctatcttggaagcaattcattccctcc
gacataaggatagtgccatttccaactcgtgaatacactgatgatgaattccagtctatc
atcaagacagtgatgggagtattgtaccttttgggttttctctacccaatttctcgccta
atcagctactctgtgtttgagaaggaagagaagataaaagaaggtctctacatgatgggt
ttgaaagatgggatatttcatctgtcttggtttattacatattctttgcagtttgcaatt
tcctctggaattatcactgtttgtacaatggacaaccttttcaagtacagcgacaaatcc
gtggttttcgtgtacttcttctcctttggactcagtgcaatcatgatgtcgtttatgatt
tctgcatttttcacaagagcaaaaacagctgttgcagttggtaccctttcttttcttggg
gccttctttccttattacacggtgaatgatgaaggtgttcctatgattctaaaagtcatt
gcttctctgctttcaccaacggcctttgctttggggtctgttaactttgctgattatgaa
cgtgctcatgttgggctccggtggagcaacatttggctggcatcatctggagtgaatttt
ctggtctgtgtagtaatgatgttgttcgactcaattttgtgttgtctgattggtttttac
ctgaataaggtccttacgggtgagcgtggagtgctttaccctttggattttatacttgac
aagggattcagacggaaaaagaatagtccaaagcaccaagttgtcagtgtggaagtacat
gacaaaagtaaagttttgaagaagagggctgcttttcctggaatagatagcgaacctgct
atcgaatcaataagcatggaaatgaaacaacaggagcttgatcaacgatgcatacagatt
aggaacttgcataaggtgtacgccacaaagaaggggacgtgttgcgcagtgaactcactg
cagctaaccctgtacgagaatcagatactagctcttctaggacataatggagctggtaag
agcacaacaatttcgatgcttgttggacttctttctcccacatcaggggatgctttggtg
cttggccgaaatattacaacagaaatggatgagataaggaaatgtctgggagtttgccct
cagaatgatatcctttttcctgaactgactgttcgggagcacttggaaatatacgcggta
ttaaagggtgtcggggaagatctactggagcgtgttgtgactgatatggttgatgaagta
ggcttggctgataaaatcaacacctgcgtgagggctctttctggtggaatgaagagaaaa
ttgtctcttgggattgctctgataggaaacagtaaggttatcattcttgatgaaccaact
agtggaatggatccatattccatgcgattgacatggcaattaattaaaaaaatcaaaaaa
ggaaggatagtactattaactacacattcaatggatgaagcagatgagctgggagaccgg
attgccataatggctaatggttcgttaaaatgctggggaagttcccttttcttgaagcat
caatttggggtgggctatacacttactttggtgaagtctgctccaactgcatctgttgct
gctgatattgtgtaccgtcatattccatcagcaatatgtataagcgaggttggaactgaa
atttccttcaagcttcctttggcatcttctccttttttcgagagtatgtttagggaaatt
gaaggttgcatgaagagatcaatgtcttcctcacgaaaattaggtgttgatgaaaatctt
ggcatagaaagctatggtatatctgtcacaacattggaggaagtattcctaagagtagct
ggatgtgattatgatgtagctgaaacggctgcagaggagaacatctctgtttcaactaac
aacaattcctctcaagattcttgtggcagtactgcgaaaatgaccttccacaataaagtc
tgtggatgctacaaaaaggccttgtggattctgcctgccttaatagggaaagcttgcagt
ttttttgttgcgggaattttaagcttattgagttgctttagtatgcagtgctgtagttgt
tccatcatttcaaggtccatattttggcaacattgtaaagctttgttcataaagagggcc
atttcagcacggagggaccgcaaaacaattgttttccagcttctgataccagcagttttt
ctatttcttgggcttctactgctgaagcttaagccacatcctgatcaacagtccatcact
tacacaacttcacattttaatcctttactgagtggtggtggaggtggtggtccaatccct
tttgatctatcatggcctatagcaaatgaggtagcccaacatgttgaaggaggattgatt
cagagattcaaaccgactacatataagttccctgattcccagcaggcattggttgatgca
gttgaggtagctgggcctaatttaggaccagctttactttccatgagtgaatatctcatg
tctagtttcaatgaatcctaccagtcaaggtatggggctgttgtgatggatgatcaaaat
gatgatggaagtttaggttacactgtgctgcacaattgttcttgtcaacattctgctccg
actttcatcaatttgatgaattccgcaattcttaggctagctacgcaagacgaaaacatg
actattcgaactcgcaatcaccctcttccaatgacagtgagccagcgggtgcagcgtcat
gatctggatgctttctcggctgcaattataattaatattgcgttctcatttattcctgct
tcatttgcagtttctattgtgaaggagcgggaagtgaaagctaaacaccagcaactaatt
agtggggtttcgatactctcatattggacgtccatctacacatgggacttcgtcagcttc
ttattcccttcatcttttgcaattgctctcttctacattttcggtttggatcaatttatt
ggagccggtagctttcttccaacggtcctgatgtttttggagtatggcctggcaattgct
tcgtcaacatattgcctcacgttcttctttacggaccataccatggcacagaatgtggtt
cttctggttcacgtcttcactggtctcattctcatggtcatctcattcatcatggggctc
atacagacaacaagaagcacaaatgattttctcaagaacttctttagagtgtcgccaggg
ttttgttttgctgatggacttgcttcactagctcttttacggcaagggatgaaggataac
tccagcagagggacttattatgattggaacgtgactggcgcctctcttttttaccttggt
gtagagagtattgtgtacttcgcattgactcttggacttgaacaatttccttctcacaag
ctgacgttggctgctgtcaaagagtcttggcaaaaaattatgaagaaccattctgataac
tctgctagttactcggagcctctcctaaaatcctcttccaaaagtggttctcttgattat
gatgaagacagtgatgtcctaatggaacggaaaagggtactttcaggttccattgataat
gccatcatctacttgcgggaccttaggaaggtgtactctggaagtaaccatcatggcata
aaggtggcagtacattctttgaccttttcagttcaagaaggagaatgctttggttttttg
gggacaaatggagcagggaagacgacaacactatcaatgctgactggggaggaatatcca
actggtggaactgctttcgtatttggcaaagatatccgctccaatcccaaggccgctcgg
cgacatattggttattgcccgcaatttgatgcgctgttggattatctcactgtccaagag
catcttgagctttatgcaaggataaaaagagtcgcagaccaaaagattaatgatgttgta
atggagaagttagtggagtttgacctgcttaaatatgcaaaaagaccatcatttactctc
agtgggggaaacaagcgcaaattatctgttgcaatcgcaatgattggggatcctcctata
gtcattctcgatgagccctctacaggtatggaccccattgccaaacggttcatgtgggac
gtgatatcccgtttatcaaccagacgaggaaagactgcagttattctaaccactcatagt
atgaatgaagctcaagctttatgtacgaggattggaataatggttggaggccgattaaga
tgcatcgggagtccccagcatttgaaaactcgttttggcaatcatcttgagttagaggtt
aaacctaccgaagtcgaccccaatgacctggtcaacctttgccaaattattcgaggaaaa
ctttttgatattcctcagcctagacgcttacttgatggcctcgaagtttgcattggggcc
atggactccattactgcagaaaatgcaacagtggcagagattagcttgtcaaaagaaatg
ataatgacagttggacactggcttggcaatgaagaaaggaccaggacacttctaatggag
gtacacctttctgacggggttgttggagaacagttgtccgaccagttgtttcgagatggt
ggcataccgttgcccattttttgcgagtggtggttaaccaaagaaaagttttcagtcatt
gactcatttgttgtatcttcctttcctggtgcaaaattccagaattgcaatgggttgtgt
gtcaaatatcagttgccatacggagaaggatcctcacttgccaatgcttttgggcatttg
gaaagaaacaggaaccgattgggaatatccgaatacagtattagtcaatctactttggaa
tccatattcaaccgttttgcagcaaatgcctga

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