Rhodamnia argentea (silver malletwood): 115729903
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Entry
115729903 CDS
T10595
Name
(RefSeq) sm-like protein LSM5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03018
RNA degradation
rarg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115729903
09123 Folding, sorting and degradation
03018 RNA degradation
115729903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115729903
03041 Spliceosome [BR:
rarg03041
]
115729903
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115729903
mRNA degradation factors
5'-3' decay
Lsm complex
115729903
Spliceosome [BR:
rarg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115729903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
115729903
NCBI-ProteinID:
XP_030516393
UniProt:
A0A8B8N1X5
LinkDB
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Position
1:complement(26369543..26371119)
Genome browser
AA seq
90 aa
AA seq
DB search
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDLYVNMVLEDVTEYWSLVASL
IWNELDSCSNPNGKLCRYSLSLSLSRHELF
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatccttcacagctcctcccgtcagagttgattgaccggtgtataggttct
aaaatctgggttataatgaagggagacaaggagcttgttggtactcttaggggcttcgat
ttgtacgtcaacatggtcctcgaggatgtcactgagtattggtctctggtggcttccctg
atctggaatgagttggattcatgctctaaccccaatggcaaattatgtaggtactctctc
tctctctctctctcaagacatgaactcttttga
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