Rhodamnia argentea (silver malletwood): 115729906
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Entry
115729906 CDS
T10595
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X2
KO
K08737
DNA mismatch repair protein MSH6
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115729906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115729906
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115729906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
115729906
NCBI-ProteinID:
XP_030516396
UniProt:
A0A8B8N1W8
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Position
4:15523095..15535317
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AA seq
1086 aa
AA seq
DB search
MQRQKSILSFLRPSSESQSSGLPSTQPSANHHQQNAAVPGKCAVGSSAEVRGTDTPPEKV
PRQILRSSDEDGGPSLFSSIMRKFGRVDGGEKTNDRHNSQSHNGTSKASPPFDKVSDLSG
HPRKDNDFKFSKKVDRECFMEIESDSDILGPETPGVRPLVPRFKRVQEETPKLEAKHDSS
SFNPGKKLKILHDSIRKSSNKNEKDTQDPTSKFEWLDPSRIRDANRRRPDDPLYDKQTLY
IPPEALSKMSATQRQYWSVKCQYMDVVLFFKVGKFYELYELDADVGHKELDWKITLSGVG
KCRQVGISESGIDDAVQKLVARGYKVGRVEQAETSAQAKARGPNSVISRKLVHVITPSTS
VDSNIGPDAVHLLAIKEGEYGQESSSIAYGFAFVDCAALKFWVGSINDDASCAALGALLM
QVAPKEVIYESRSLSKEALKAIRKYSLTGNMAVQLTPVMPVAGFPNSSDVMDSIQSKDYF
KRCSILPNCALDGVVQHDVALCALGGLIDHMSRLMLDDVLKNGDITPYEVYKGCLRMDGQ
TLVNLEIFSNSADGGTSGTLYKYLDNCTTCSGKRLLRHWICHPLKDVESINDRLNVIDSL
SAQPEVMSLIAQNLRKLPDLERLLGRVKSSVQRSASLLLPLVAQKVLKNLVKFFGSLVKG
MRTAVNLLMLLQEERNISSSLSKVFGIPVLGSNNGLDKYLTQFEAAIDSDFPKYQDHDVT
DSDAETLSILIELFVEKAPQWSAVVHAINCIDVLRSFTLTAKSSLGASSRPVILPQSKTM
RLSREAKGPILKITGLWHPFALGENGGLPVPNDIFLGEDTDGYHPHTLLLTGPNMGGKST
LLRATCLAVILAQLGCYVPCERCILSSVDIIFTRLGATDRIMAGESTFFVECTETASVLQ
NATEDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFGSHPRV
TLQHMACALKSNGGNHSKSDQELVFLYKLSSGACPESYGLQVACMAGIPQQVVESASKAG
QLMKMSVGKSFKSSEQRLEFSTLHEEWLKTLLSVAQTGGHNVNDDEDSLDTFFCLWHELK
SLYPRK
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtcagaagtccatcctctccttcctcaggccctcgtcggagagccagagctcc
ggcctcccgtcgactcagccttcggcgaaccaccaccagcagaacgccgccgtcccgggc
aaatgcgcggtcggctcgtccgcggaagtacgaggcaccgacactccgccggagaaggtc
ccgcgccagattctccggtcgagcgacgaggacggcggtccctctctgttctccagcatc
atgcgcaagtttggtagggtcgacggtggagagaagacgaacgatcggcacaattcacag
tcgcacaatggtacatctaaggcttcccctccatttgataaagtcagtgacctcagcggt
catcctagaaaggacaatgatttcaagttcagcaagaaggttgatcgagaatgtttcatg
gaaattgaaagtgacagtgacattcttggtcctgaaaccccaggtgttagaccccttgtg
cctcgatttaagcgagttcaagaggaaactcctaagttagaggctaaacatgactcatcc
tctttcaatcctggaaaaaagttgaaaattctccatgactctattcgcaaatcgtcaaat
aagaatgagaaagacacgcaggatcctacaagcaaatttgagtggcttgatccttctcga
attagggatgctaacagaagaagacctgatgatcctctctatgacaagcagacgctttac
atacctcctgaggctctgagcaagatgtcagctactcagagacaatattggagtgttaaa
tgtcaatatatggatgtcgtgcttttctttaaagtgggaaagttttatgagctgtatgaa
ctggatgcagacgttggtcacaaagagcttgactggaagattacattaagtggcgttgga
aaatgtcggcaggttggaatctccgagagtggaattgacgatgctgttcagaaactggtt
gctcgtggatataaagttggacgagtggagcaagcggagacatctgcacaagcaaaagcc
agaggtccaaattctgtaatttcaagaaaattggttcatgttatcactccatcaacctca
gtggatagcaacattggccctgatgctgttcatcttcttgcaataaaagagggggaatat
ggacaagagagcagttcaattgcttatggttttgctttcgttgattgtgctgctctgaag
ttttgggttggttccattaatgatgatgcttcttgtgccgcgttgggggctctgttgatg
caggtagcacccaaggaagtaatatatgagagcagaagtttatcaaaagaagcgttgaaa
gcaatcagaaagtactcattgacaggcaatatggcagtgcaactgactcctgtgatgcca
gttgccggtttcccaaattcttctgatgttatggattcaattcagtcaaaagactacttc
aagaggtgttccatcttgccgaattgtgcacttgatggtgttgtgcaacatgatgttgcc
ttatgtgcattaggtggtcttattgatcatatgtcaaggttgatgttagatgatgttttg
aagaatggcgatatcacgccttatgaggtgtataagggttgcctcagaatggatgggcag
acattggtgaatcttgagattttcagcaacagtgcggatggtggtacatcaggtacatta
tacaagtaccttgacaactgtacaacttgttcggggaagcgtcttttaagacactggatc
tgtcatcccctcaaagatgtagagagcattaatgatagactcaatgtcatcgatagtctg
tcggcacaaccagaagtaatgtctcttattgctcaaaatcttcgcaaactgccagactta
gaaaggctgctcgggagggtcaagtccagcgttcagcgatcagcctccttgttactgccg
ttggttgcgcaaaaagtactaaaaaatttggtgaaattttttgggtctcttgtgaaaggc
atgcggactgcggtgaatttgctaatgttattacaggaagaaaggaacataagctcatcg
ctatcaaaagtcttcggaattccagtgttaggcagtaacaatgggcttgataagtatctc
acccaatttgaagcagccattgatagtgatttcccaaagtaccaggaccatgatgtaacg
gattcggatgctgaaaccctttctattctgattgaattgtttgttgagaaagccccccaa
tggtctgctgtcgttcatgccatcaactgtattgacgtattaagatcttttacactgact
gcaaaatcttcacttggagcttcatctcgacctgtcattttgcctcaatcaaaaacaatg
cgcttaagccgagaggccaagggaccaatacttaagataacagggctgtggcatccattt
gccttgggtgagaatggaggattgccagtacctaacgacatatttcttggtgaagataca
gatggttatcatccgcatacattgctgttgactggaccaaatatgggtggaaaatcaaca
cttttgcgcgccacgtgtcttgcagttatacttgcccagttgggatgttatgttccttgt
gagagatgtatactctcctcagttgacatcatctttacacggcttggtgccactgatagg
ataatggctggcgagagtaccttctttgttgagtgcacagaaacagcatcagttcttcaa
aatgccactgaagattctcttgttattcttgatgaacttggtcgagggacaagcactttt
gatggttatgccatcgcctatgctgtattccggcatcttgttgagaaggttaattgccgg
ctattgtttgcaacacactaccaccctctgacaaaggaattcggctctcatccacgtgtt
accctgcaacacatggcctgtgctctcaagtcgaatggtggaaatcactccaagagcgac
caggagctggttttcctctacaagctttcgtctggggcatgtcctgagagttatggcttg
caagtagcttgtatggctggaattccacaacaggtggttgaatctgcttcaaaggctggc
caactaatgaagatgtcagttggcaaaagtttcaaatcaagcgagcagaggttggagttt
tcaacccttcatgaagagtggctgaagacgctactatctgtagcacaaactggaggacat
aacgtgaatgacgatgaagattctctggataccttcttttgcctctggcatgaattgaag
agcctgtacccacgtaagtaa
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