Rhodamnia argentea (silver malletwood): 115730176
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Entry
115730176 CDS
T10595
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03420
Nucleotide excision repair
rarg04120
Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
115730176
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
115730176
TCR (transcription coupled repair) factors
Cul4-CSA complex
115730176
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115730176
NCBI-ProteinID:
XP_030516631
UniProt:
A0A8B8N2J7
LinkDB
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Position
1:complement(35012333..35026409)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIVAKCTRIEIHLLTPQGLQAMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAETSELVTRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNVDNGADLLIPVPPPLCGVLIIGEETIVYC
SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVFIGSSFGDSQLVKLNLQPDSKGSYVEVLERYVNLGPIVDFSVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSIDDPFDTFLVVS
FISETRILAMNLEDELEETEIEGFCPQVQTLFCHDAVHNQLVQVTSSSVRLVSSMTRELR
NEWHSPQGYSINVATANATQVLLATGGGNLVYLEIGDGVLKEIKHVQLEYEISCLDINPI
GENLHYSQLAAVGMWTDISIRIFSLPDLNLITKENLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFQLNMHSGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCQFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAICSMKYNQSSAEESEMHFVRLLDDQTFDFMSTYPLDTFEHGCSILSCSFSDD
NNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGSRELPAECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDTYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTIIFGTVNGVIGVIASLPHDQYVFLEKLQSNLRKV
IKGVGGLSHEQWRSFYNEKKTVDARNFLDGDLIESFLDLSRGRMDEISKAMSVSVEELCK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgtggaactacgtcgtcacggcgcacaagcccaccaacgtcacccactcctgc
gtgggcaacttcaccggccctcaggagctcaatctcatcgttgccaaatgcactcgaatt
gaaatacatttgcttactcctcagggtttacaggctatgctggatgtcccaatttatggg
agaattgcaacgcttgagctttttaggcctcatggtgaggcacaggattttttattcatt
gccactgaaagatacaagttctgtgttcttcaatgggatgccgagacatctgagcttgtt
acaagggcgatgggcgatgtatctgatcggataggtcgtccaacagataacggtcagatt
ggaataattgatcctgattgtagattaattggtctccacttatatgatgggttgtttaag
gttataccttttgacaataaagggcagcttaaagaagcattcaacatcaggcttgaagaa
cttcaagttctggatataaagtttctctatggttgctcaaaacctacgattgttgttcta
taccaggataacaaagatgctcgacatgtcaagacttatgaggttgctctgaaagacaag
gatttcgttgagggtccctggtctcaaaacaatgtagataatggtgcagatctgttgata
ccagtgcctccccctctatgtggtgttcttataattggggaagaaacaattgtatattgc
agtgcaaatgcatttaaagcaataccaattaggccgtccatcactaaagcatatggaaga
gtcgatgctgatggttctaggtatctacttggtgatcatgctgggcttctccacttgctt
gttataacccatgagaaagaaaaagttacaggcctcaagattgagcttttaggagaaact
tcaattgcatccacgatatcataccttgacaatgcctttgtttttattggctcaagtttt
ggtgattcacagcttgtcaagttgaatctacaacctgattcgaagggttcatacgtggaa
gttctggagcgctatgttaacttgggacccatcgttgatttctctgtggttgaccttgag
aggcagggtcagggtcaggttgttacttgttctggagcttacaaggatggttctctccgt
atagtacggaatggcataggaatcaatgaacaggcatctgtagaactacaaggcattaaa
ggaatgtggtctttgagatcttctatagacgatccttttgacactttcctggttgtaagc
tttattagtgagacaagaattttggccatgaatcttgaagatgagttggaagaaactgag
atagagggtttttgtcctcaagttcaaactctcttctgccacgatgctgtgcacaatcaa
cttgtccaagtgacttcaagctctgtgagacttgtaagctctatgacgagagagctgagg
aatgaatggcattctccacaaggatattctattaatgttgccactgctaatgccactcag
gttctactggcaactggaggtggtaatcttgtttatctagaaatcggcgatggggttttg
aaagaaatcaaacatgtacagctagaatatgagatctcatgccttgacattaatcccatc
ggggagaatctccattacagtcagctggcagcagttggaatgtggacggatataagtatt
aggatattttcattgccagacttgaatctcattaccaaggagaatttgggaggagaaata
atacctcgttctgttctgctctgtgcctttgaagggatatcttacctcttatgtgctctt
ggagatggtcatctcttaaactttcaattgaacatgcattctggtgagttaacagatagg
aagaaggtgtctctcgggactcagcccattaccctccgtacgttctcatcaaaaaatact
acgcatgtatttgctgcgtcagataggccaaccgtcatttacagcagtaacaaaaagtta
ctctacagtaatgtaaatctcaaagaagtgagccacatgtgccaattcaactctgctgct
tttcctgacagtctggcaattgcgaaagaaggcgagcttactattggtaccattgatgat
atccagaaacttcacatccgctctatcccccttggggagcatgcacgacgcatttgccat
caggagcagtctcggacttttgcaatttgtagcatgaagtacaaccagtcgagtgctgaa
gaatctgaaatgcattttgttcggcttttagatgaccagacttttgatttcatgtccact
tacccgcttgatacatttgagcacggttgctccatacttagttgttccttttctgatgac
aataatgtgtattactgtgttgggactgcatatgtgctgccggaagaaaatgaaccaacc
aagggccggatattagttttcattgttgaggatgggaaattacagctgattgctgaaaaa
gagaccaagggggctgtttactctttgaatgcttttaatggaaagctattagctgcaatc
aatcaaaaaattcaattgtacaagtggatgctgcgagatgatggttctcgtgaattgcca
gctgaatgcggacatcacggtcacatacttgccctctatgtacaaactcgcggagacttc
attgtagttggtgatctgatgaagtcaatatccctgctgatatacaagcatgaggagggt
gccattgaggagcgggcacgtgattacaatgcaaattggatgtctgctgttgagattctc
gatgatgacacttatcttggtgctgaaaataacttcaacctcttcacagtgaggaagaac
agcgaaggtgccaccgatgaggagaggggccgtcttgaggtggttggcgagtatcacctt
ggggaattcgttaaccggttccgccatggttccctcgtgatgcggttgccggattccgat
gtcggtcagattccgaccatcatatttggcacggttaacggcgtgattggagtgattgcc
tcgctccctcatgatcagtatgtatttctagagaagcttcagtcaaacttgagaaaggta
attaaaggagttggaggactgagccatgagcagtggaggtcgttttacaacgagaagaag
accgtggatgctcggaatttcttggatggagatctcatcgaatcgttcctagaccttagc
cgtgggcggatggatgagatatccaaagcaatgagtgtttcggtggaggaactctgcaag
agagttgaagagttgaccagactgcattga
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